Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1053 ATGGAAGGTGGTGATGAACTAAGGGTAGCAAGTGCACGAATAGGAAGCTCAAGAATTTGGAGAAGCAATGGATTTGATGGGTTTTCAGGGTCTTCAAGAAGAGAAGAAGATGAAGAAGAAGAGCTTAAATGGGCTGCAATAGAGAAACTACCAACTTTTCTACGTATGAGTAGGGGTATACTCAGTGAAAGTGAAGGTCAACCTGGTACTGAGATTCATATCAATAAACTTGGATCACTTCAGAGGAAGGATTTGGTTGAGAGGCTTGTTAAGATTGCTGAGGAAGATAATGAGAAGTTCTTGTTGAAGTTGAGAGAACGCATTGATCGAGTTGGACTTGATATTCCGACAATTGAAGTCCGTTTTGAGCATTTGAATGTCGAAGCAGAAGCTCATGTAGGAAGCAGGGCATTGCCAACAAACTTTAACTTCTGCATTAATTTGTTAGAGGGGTCCCTGAATGATCTTCGCCTTCTTCCTAGTCGAAAGAAGCAATTCACAGTTCTTCATGATGTAAGTGGAATCATCAAGCCTAGAAGGATGACACTACTCTTAGGCCCACCGAGCTCCGGAAAGACCACATTATTGTTGGCACTGGCTGGAAGACTCAGCAAAGATCTAAAACTTTCGGGGAGAGTTGCGTATAATGGTCACGGGATGGAGGAATTTGTGCCTCAAAGAACATCAGCTTACATAAGTCAATATGATCTCCACATAGGAGAAATGACAGTCAGAGAAACATTGGCTTTTTCAGCCAGGTGCCAAGGAATCGGTTCCCGTTATGAGATGCTGGCAGAATTATCAAGAAGAGAGAAAGCCTCGAATATTAAGCCAGATCCCGATATCGATATTTATATGAAGGCAGCAGCACTAGAAGGCCAAGAAGCCAATGTAGTTACAGATTATATACTCAAGATTTTGGGATTAGAAGTTTGTGCTGATACAATGGTAGGAGATGATATGATTCGGGGCATTTCCGGTGGACAAAAAAAGAGAGTCACAACTGGTGAGATGCTAGTTGGACCAGCAAGAGCACTTTTCATGGATGAAATATCAACTGGTTTGGACAGTTCTACCACATTCCAAATGATTAATTCTCTAAGACAATCTATCCACATTCTGAATGGAACCGCCGTGATCTCTCTTCTACAGCCGGCGCCAGAAACTTATGAGTTATTTGATGATATAATTCTCCTCTCAGATGGACAAATTGTGTATCAGGGTCCAAGGGACAATGTGCTTGAATTCTTTGAATTCATGGGTTTCAAGTGTCCAGAGAGGAAAGGAGTAGCCGATTTCTTACAAGAAGTAACATCAAGAAAGGATCAAGAGCAGTACTGGGCAAATAAAGATGAACCATATAGCTTTATCACTGTTAAAGAATTTTCTGATGCATTTCAGTCTTTTCACATTGGTCAAAAACTCGGTGACGAACTCGCTACTCCATTTGATACTTCCAAAGGCCACCCTGCTGTTTTAACCAAAAACAAGTATGGTGTTAGCAAGAAGGAACTACTAAAAGCTTGTGTATCAAGAGAATTCTTACTTATGAAAAGGAATTCATTTGTCTATATTTTCAAGATGTGGCAACTGTTTTTTATGGCCTTCATAACAATGACATTATTCCTGAGAACTGAGATGCACCGAGACACGGTAAACGATGGTGGGATTTATATGGGTGCTTTGTTCTTCACACTCATAGTAATCATGTTCAACGGATCGGCAGAGATAAACATGACCATTGTGAAACTTCCTGTTTTCTATAAGCAAAGGGAACTTCTCTTTTATCCTTCTTGGGCATACTCTCTCCCTACATGGATCCTTAAGATTCCTATCACCATAATAGAAGTTGGTATTTGGGTTATCATGACTTACTATGTTATAGGCTTTGATCCAAATTTTGAAAGGTTCATCAAACAGTACTTTCTGCTAGTTTGTATCAACCAGACGGCGTCCGGACTTTTTCGATTTATGGGAGCAGTTGGGAGAAACATTATTGTAGCAAACACATTTGGTTCATTTGCATTACTAGCACTAATGGCCCTGGGTGGTTTTGTTCTATCTAGAGTTGATGTGAAGAAATGGTGGCTATGGGGTTATTGGGTCTCACCCATGATGTATGCACAAAATGCCTTGGCTGTGAATGAATTCCTTGGAAAGAGTTGGGCACATGTTCCGCCGAATTCAACACAATCATTAGGAGTACAGGTCTTGAAAGCAAGGGGGTTTTTCCCTGAAGCATACTGGTATTGGATTGGAGTTGGAGCTTGTATTGGATACATGTTACTATTCAACTTCCTTTTCCCCTTGGCCTTACAGTATCTTAACCCATTTGATAAACCCCAAGCATTAATATCAGAAGAAGCCTTAGCTGAGAGAAATGCAGTTAGAAAAGATCATATCATTGAATTGTCGTCTACATACAAAGGTTCTTCAGATATAAGTAGAAGAAATGTGTCCTCAAGAACTCTGTCTGCAAGAGTTGGCAGCTTTAGTGCAGTTCATCACAGCAAGAAGCGAGGGATGGTTCTTCCTTTCACACCCCTTTCTATCACTTTTGATGAAATCAGATATGCAGTGGACATGCCACAGGAAATGAAGGCCCAGGGTTTTCCTGAAGATCAACTTGAACTTTTGAAGGGTGTTAATGGAGCTTTTAGACCAGGAGTTCTAACAGCTCTAATGGGTGTAAGTGGAGCAGGTAAAACTACTCTAATGGATGTGCTATCTGGAAGGAAAACAACAGGTTATGTTCAAGGACAAATCACCATATCCGGGCACCCGAAAAAGCAAGAAACGTTTGCTCGCATATCAGGATACTGTGAACAAACTGACATCCATTCGCCCCATGTTACAGTCTATGAGTCACTTGTTTATTCTGCATGGCTCAGGTTACCTCCTGAGGTTGATTCCTCAACAAGACAGATGTTCATTGAGGAAGTTATGGAGTTGGTAGAGTTGACTTCATTAAGAGAAGCACTGGTTGGATTGCCCGGTGTGAATGGTTTGTCCACGGAGCAGCGCAAAAGATTAACAGTTGCAGTTGAGCTTGTAGCCAATCCGTCTATTATTTTCATGGACGAACCTACCTCTGGTCTTGATGCCAGAGCTGCTGCTATAGTTATGAGAACAGTGAGAAACACAGTGGACACTGGGCGAACCGTGGTCTGTACAATCCACCAGCCAAGCATTGATATATTTGATGCTTTTGATGAGCTAATTCTCTTGAAACGCGGAGGCGAGGAAATATATGTGGGGCCTTTAGGCCAGCATTGCTCTCATCTGATCAATTACTTTGAGGGAATTAATGGAGTGCCAAAAATTAGGAATGGCTATAATCCTGCCACTTGGATGTTGGAGATTACTTCAGAAGCACAAGAAGCCGCTCTTGGAGTTAACTTTGCTGAAATATACAAGAATTCTGACCTATATAGGAGAAACAAGGACTTGATAAGGGAACTTAGTACACCGCTACCGGGTTCTAAAGACTTGTATTTCCCAACAACGTACTCACAGACTTTCTTAACCCAATGCATGGCTTGCCTTTGGAAACAGCGCCTGTCATATTGGCGAAATCCGCCATATAGTGGAGTGAGATTTTTATTCACAACATTCATAGCCTTGATGTTCGGAACAATATTTTGGGATATCGGCTCGAAAAGTGGAAGAATACAAGATCTCTTCAATGCAATGGGATCCATGTATGCTGCAGTCCTCTTCATTGGGGTAAGTAATGCTACATCTGTGCAACCAATTGTAGCCATTGAAAGAACAGTCTTCTATAGAGAACGAGCTGCGGGAATGTACTCGGCTTTGCCATATGCATTTGGACAGATTGCTATTGAGATCCCATACATATTCATACAGACCGCGGTTTACGGGATAATAGTATATGCCATGATTGGTTTTGAGTGGACAGCAAGCAAATTCTTTTGGTATCTCTTCTTCATGTTCTTCACCTTTTTATACTTCACCTTCTATGGCATGATGGCTGTAGGCGCTACGCCGGATCAGAATATCGCTGCTATAACTTCTTTTGCATTCTACTTGATATGGAACCTTTTCTCAGGATTCATCATTCCTCAAAAGAGAATGCCCATATGGTGGAGATGGTACTTCTGGATTTGCCCTGTGTCATGGACCCTATATGGATTGGTTACTTCACAATATGGTGATGTACAAGAACATTTAGAGACTGGAGAGACAGTGCAAGAGTTTCTTTTTAATTATTTTGGGTATAGACATGATTTCATAGGAGTAGCTGCATCTGTTCTTGTTGGCTTTACACTTCTCTTTGGATTTACTTTTGCCTTTTCAATTAAGACATTTAATTTCCAAAAGAGATGA 4347 0.4113 MEGGDELRVASARIGSSRIWRSNGFDGFSGSSRREEDEEEELKWAAIEKLPTFLRMSRGILSESEGQPGTEIHINKLGSLQRKDLVERLVKIAEEDNEKFLLKLRERIDRVGLDIPTIEVRFEHLNVEAEAHVGSRALPTNFNFCINLLEGSLNDLRLLPSRKKQFTVLHDVSGIIKPRRMTLLLGPPSSGKTTLLLALAGRLSKDLKLSGRVAYNGHGMEEFVPQRTSAYISQYDLHIGEMTVRETLAFSARCQGIGSRYEMLAELSRREKASNIKPDPDIDIYMKAAALEGQEANVVTDYILKILGLEVCADTMVGDDMIRGISGGQKKRVTTGEMLVGPARALFMDEISTGLDSSTTFQMINSLRQSIHILNGTAVISLLQPAPETYELFDDIILLSDGQIVYQGPRDNVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYSFITVKEFSDAFQSFHIGQKLGDELATPFDTSKGHPAVLTKNKYGVSKKELLKACVSREFLLMKRNSFVYIFKMWQLFFMAFITMTLFLRTEMHRDTVNDGGIYMGALFFTLIVIMFNGSAEINMTIVKLPVFYKQRELLFYPSWAYSLPTWILKIPITIIEVGIWVIMTYYVIGFDPNFERFIKQYFLLVCINQTASGLFRFMGAVGRNIIVANTFGSFALLALMALGGFVLSRVDVKKWWLWGYWVSPMMYAQNALAVNEFLGKSWAHVPPNSTQSLGVQVLKARGFFPEAYWYWIGVGACIGYMLLFNFLFPLALQYLNPFDKPQALISEEALAERNAVRKDHIIELSSTYKGSSDISRRNVSSRTLSARVGSFSAVHHSKKRGMVLPFTPLSITFDEIRYAVDMPQEMKAQGFPEDQLELLKGVNGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTTGYVQGQITISGHPKKQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSSTRQMFIEEVMELVELTSLREALVGLPGVNGLSTEQRKRLTVAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELILLKRGGEEIYVGPLGQHCSHLINYFEGINGVPKIRNGYNPATWMLEITSEAQEAALGVNFAEIYKNSDLYRRNKDLIRELSTPLPGSKDLYFPTTYSQTFLTQCMACLWKQRLSYWRNPPYSGVRFLFTTFIALMFGTIFWDIGSKSGRIQDLFNAMGSMYAAVLFIGVSNATSVQPIVAIERTVFYRERAAGMYSALPYAFGQIAIEIPYIFIQTAVYGIIVYAMIGFEWTASKFFWYLFFMFFTFLYFTFYGMMAVGATPDQNIAAITSFAFYLIWNLFSGFIIPQKRMPIWWRWYFWICPVSWTLYGLVTSQYGDVQEHLETGETVQEFLFNYFGYRHDFIGVAASVLVGFTLLFGFTFAFSIKTFNFQKR* 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1053 1448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 426 IPR027417 -
Lan3g1053 1448 CDD ABCG_PDR_domain2 848 1086 IPR034003 -
Lan3g1053 1448 Pfam ABC-2 type transporter 1060 1117 IPR043926 GO:0140359
Lan3g1053 1448 Pfam ABC-2 type transporter 384 437 IPR043926 GO:0140359
Lan3g1053 1448 SMART AAA_5 888 1080 IPR003593 -
Lan3g1053 1448 SMART AAA_5 178 410 IPR003593 -
Lan3g1053 1448 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 10 1448 - -
Lan3g1053 1448 Pfam ABC-2 type transporter 1176 1389 IPR013525 GO:0016020|GO:0140359
Lan3g1053 1448 Pfam ABC-2 type transporter 505 717 IPR013525 GO:0016020|GO:0140359
Lan3g1053 1448 Pfam ABC transporter 169 351 IPR003439 GO:0005524
Lan3g1053 1448 Pfam ABC transporter 879 1031 IPR003439 GO:0005524
Lan3g1053 1448 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 851 1104 IPR003439 GO:0005524
Lan3g1053 1448 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 153 426 IPR003439 GO:0005524
Lan3g1053 1448 Pfam ABC-transporter N-terminal 87 144 IPR029481 -
Lan3g1053 1448 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1448 - -
Lan3g1053 1448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 874 1091 IPR027417 -
Lan3g1053 1448 Pfam Plant PDR ABC transporter associated 722 785 IPR013581 -
Lan3g1053 1448 Gene3D - 156 464 IPR027417 -
Lan3g1053 1448 Gene3D - 866 1095 IPR027417 -
Lan3g1053 1448 CDD ABCG_PDR_domain1 151 408 IPR034001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1053 Lan-Chr3 22833065 22840810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1053 889 1105 Calmodulin-binding Proteins AT2G36910 24.554 3.50e-06 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1766 6 28893161 28902775 Lan3g1053 3 22833065 22840810 LSH
Lan6g1766 6 28893161 28902775 Lan3g1053 3 22833065 22840810 PCT
Lan3g1053 3 22833065 22840810 Lan3g1053 3 22833065 22840810 PCT