Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1031 ATGAAACAAGCACATATACTCCTCTTTTTAGTCCTAGTCATGTCTATAATGACTTTTCATTGCACAAATGCAAAAATAACACAACCAAACCCTCCCTTTGGGTTCACCTTAGGGGAAAATTTAAAGGTCTCATTGAGTGTCATGATAATTGCCTTCTTATCTGCCTTAGTCTTCATGGCTATATTTTCACTATACCTTTGTCATTGTTCCTATAACGACCAATACGGTTCCATTAACCATCTAAACCCAATTGCAGCCGCGGCCGAACTATTTCGCCGCAGCTGCAATCGTCATATAATCGAAAAGTGTCCCATCCTAATATATTCTATGGTGAATGACCTTAAAATTGGCAAAGGGGCACTTGTATGTGCCGTGTGCTTGAATGAGTTTGAAGAGAATGAAGAGATAAGGTTGCTTCCAAAATGCTATCATGTTTTTCATCCTCATTGCATTGATGTGTGGTTATTTTCTCACATGAATTGTCCCATTTGTCGCACAAGGCTCACTTCTGATATGGCCAACAATGTCATTGCCACCCCAATTTTCACGTCCAATGAACATGGTACTAGGGGCCGTGAAACAGAGAATGAGCAACATCAACATGTGGAACAAGAAGAAGAAGAAGAAAGACAAAGAAGTACAATTATGGGAACAGAGGAGAATGTATTAACACATGACACTAGTGTTCTTACTCAAACAGTTCCTACACGTGAATTGAGAATAACGTTTGGGAAGTTTCTACTAAGGTCACATTCAACGGGTCACTCTCTCGTGGAAGAACCAGAGGTGAATGTGGATAGACACACTTTAAGGTTGGCTGAGCACGTGAGAAAGCAGATTGTGTGTTTGAGAAGGAACGACGTCGCTTTGCCAGGAGTATGGAGTTCAAAAAGAACATGGTCATCGATGACTCCACCATTTGTTTCTAGTGGCTGGAGTGAAACGACGTGCTGGACACCACTTAGGATGTCGTTTTGTAACACCAAGGGACCTCAAAAACCGTTCCATCTACTTCCACTTTGA 1023 0.4145 MKQAHILLFLVLVMSIMTFHCTNAKITQPNPPFGFTLGENLKVSLSVMIIAFLSALVFMAIFSLYLCHCSYNDQYGSINHLNPIAAAAELFRRSCNRHIIEKCPILIYSMVNDLKIGKGALVCAVCLNEFEENEEIRLLPKCYHVFHPHCIDVWLFSHMNCPICRTRLTSDMANNVIATPIFTSNEHGTRGRETENEQHQHVEQEEEEERQRSTIMGTEENVLTHDTSVLTQTVPTRELRITFGKFLLRSHSTGHSLVEEPEVNVDRHTLRLAEHVRKQIVCLRRNDVALPGVWSSKRTWSSMTPPFVSSGWSETTCWTPLRMSFCNTKGPQKPFHLLPL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1031 340 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
Lan3g1031 340 Coils Coil 192 212 - -
Lan3g1031 340 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE 7 292 - -
Lan3g1031 340 MobiDBLite consensus disorder prediction 188 212 - -
Lan3g1031 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 179 IPR013083 -
Lan3g1031 340 Pfam Ring finger domain 123 165 IPR001841 -
Lan3g1031 340 SUPERFAMILY RING/U-box 122 172 - -
Lan3g1031 340 CDD RING-H2_EL5_like 122 165 - -
Lan3g1031 340 PANTHER RING FINGER DOMAIN-CONTAINING 7 292 - -
Lan3g1031 340 SMART ring_2 123 164 IPR001841 -
Lan3g1031 340 MobiDBLite consensus disorder prediction 184 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1031 Lan-Chr3 22668345 22672483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1031 1 281 Rapid Response to Elicitors AT3G05200 34.843 2.26e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1031 K10664 - egt:105976389 177.563