Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1010 ATGGATCATGCTGAATTAACCACCGATCAGGTTCTGAAGAGGGACATACCATGGGAGACCTACATGGCCACCAAGCTCATCTCCGGGACAAGCCTTCAGCTCTTGCGCCGTTACGATCACCAGCCCGAAAGTCACAGAGCACAGTTGCTTGATGATGATGGTCCAGCTTATGTCCGGGTGTTTATTCAAGTTTTGCATGATATTTTTAAAGAAGATACTGTAGAGTATGTTTTGGCGCTGGTTGATGAAATGCTTGCAGCAAACCCGAAAAGAGCAAGGCTGTTTCATCATATTACCCTTGCTGTTGAAGATACTTATGAACCTTTCTTAAGATTGCTTTGGAATGGAAACTGGTTCATAAAAGAGAAAAGTTGTAAGATCCTTGCTTTAATAGTTAGTGTCAGTCCAAAAAATCAGAATGGCATTGTTTCAAATGGAGAAGCATCAAACTCAAAGAATCCGTTTACCCCTATCGATGATGTTTTGATAGGATTGGTAAAATGGCTTTGTGAACAGCTGAAGAAACCTTCTCATCCTAATCGTGGAGTCCCGACTGCTGTCAATTGCCTTTCAACCATACTTAAGGAACCTGTGGTTAGGTCTTCTTTTGTTCAAGCAGATGGAGTCAAGCTGCTTGTGCCATTGATTTCTCCAGCATCCACCCAACAGTCTATTCAGCTTCTGTATGAAACATGTCTCTGCATATGGCTCTTATCTTATTATGAGCCGGCAATTGAATATTTGGCTACTTCAAGGGCCCTTCCGCGACTGATTGATGTTGTTAAGAGCTCTACAAAAGAGAAGGTTGTTAGAGTAGTTGTCTTGACTCTTAAAAACTTGCTGTCAAAAGGGACCTTGGGTGCTCAGATGGTTGACTTTCAGCTGCCACAAGTTGTTCAGAGTTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCACTGAATTCCCTTGAAGAGGGGCTTAAGGATAACATTAAGAAACTTAGTTCTTTTGATAAGTACAAGCAAGAAGTTCTGCTTGGCCATCTGGATTGGTCTCCCATGCACAAAGATTGCTTATTTTGGCGAGAAAATATTACCAACTTTGAAGAGAATGATTTCCAGATTCTAAGGGTCCTGATAACAGTTTTGGACATATCCAATGATCCAAGGACTCTGGCTGTTGTTTGCTTTGACCTTTCACAGTTCATTCAGCACCATCCTTCTGGGAGGCTCATTGTGGCCGATCTTAAAGCTAAGGAACGAGTAATGAAATTAATGAATCACGAGAATGCTGAGGTTACTAAAAGCGCATTACTCTGCATCCAACGACTTTTCTTAGGATCGAAGTATGCAAGCTTTTTGCAGGCTTAG 1359 0.4202 MDHAELTTDQVLKRDIPWETYMATKLISGTSLQLLRRYDHQPESHRAQLLDDDGPAYVRVFIQVLHDIFKEDTVEYVLALVDEMLAANPKRARLFHHITLAVEDTYEPFLRLLWNGNWFIKEKSCKILALIVSVSPKNQNGIVSNGEASNSKNPFTPIDDVLIGLVKWLCEQLKKPSHPNRGVPTAVNCLSTILKEPVVRSSFVQADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRALPRLIDVVKSSTKEKVVRVVVLTLKNLLSKGTLGAQMVDFQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDCLFWRENITNFEENDFQILRVLITVLDISNDPRTLAVVCFDLSQFIQHHPSGRLIVADLKAKERVMKLMNHENAEVTKSALLCIQRLFLGSKYASFLQA* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1010 452 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 452 IPR004908 GO:0000221|GO:0046961|GO:1902600
Lan3g1010 452 SMART arm_5 402 442 IPR000225 GO:0005515
Lan3g1010 452 SMART arm_5 195 240 IPR000225 GO:0005515
Lan3g1010 452 SMART arm_5 241 282 IPR000225 GO:0005515
Lan3g1010 452 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 452 - -
Lan3g1010 452 Pfam V-ATPase subunit H 329 441 IPR011987 GO:0000221|GO:1902600
Lan3g1010 452 PIRSF V-ATP_synth_H 1 451 IPR004908 GO:0000221|GO:0046961|GO:1902600
Lan3g1010 452 SUPERFAMILY ARM repeat 7 443 IPR016024 -
Lan3g1010 452 Gene3D - 343 444 IPR038497 -
Lan3g1010 452 Pfam V-ATPase subunit H 3 323 IPR004908 GO:0000221|GO:0046961|GO:1902600
Lan3g1010 452 Gene3D - 2 331 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1010 Lan-Chr3 22075397 22091971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1010 1 452 Primary Pumps ATPases(2) AT3G42050 76.991 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1010 K02144 - gmx:100788723 813.913