Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1009 ATGGTTGACTTTCAGCTGCCACAAGTTGTTCAGAGTTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCACTGAATTCCCTTGAAGAGGGGCTTAAGGATAACATTAAGAAACTTAGTTCTTTTGATAAGTACAAGCAAGAAGTTCTGCTTGGCCATCTGGATTGGTCTCCCATGCACAAAGATTGCTTATTTTGGCGAGAAAATATTACCAACTTTGAAGAGAATGATTTCCAGATTCTAAGGGTCCTGATAACAGTTTTGGACATATCCAATGATCCAAGGACTCTGGCTGTTGTTTGCTTTGACCTTTCACAGTTCATTCAGCACCATCCTTCTGGGAGGCTCATTGTGGCCGATCTTAAAGCTAAGGAACGAGTAATGAAATTAATGAATCACGAGAATGCTGAGGTTACTAAAAGCGCATTACTCTGCATCCAACGACTTTTCTTAGGATCGAAGTATGCAAGCTTTTTGCAGGCTTAG 492 0.4146 MVDFQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDCLFWRENITNFEENDFQILRVLITVLDISNDPRTLAVVCFDLSQFIQHHPSGRLIVADLKAKERVMKLMNHENAEVTKSALLCIQRLFLGSKYASFLQA* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1009 163 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 163 - -
Lan3g1009 163 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 163 IPR004908 GO:0000221|GO:0046961|GO:1902600
Lan3g1009 163 Gene3D - 54 155 IPR038497 -
Lan3g1009 163 Pfam V-ATPase subunit H 40 152 IPR011987 GO:0000221|GO:1902600
Lan3g1009 163 SUPERFAMILY ARM repeat 1 154 IPR016024 -
Lan3g1009 163 Gene3D - 1 42 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1009 Lan-Chr3 22056015 22060070 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1009 1 163 Primary Pumps ATPases(2) AT3G42050 80.368 1.50e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1009 K02144 - lja:Lj4g3v0911410.1 304.679