Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0998 ATGACATTCAAGCGTAGGAATGGTGGACGTAACAAGCATGGCCGTGGCCACGTCAAGTTCATTCGTTGCTCCAATTGTGGCAAATGCTGCCCCAAGGATAAATCAATTAAGCGATTTGTGGTGAGAAACATTGTTGAGCAGGCTGCTGTTAGAGATGTTCAGGAGGCCTGTGTCTTTGAGCAATACACTCTTCCAAAGTTGTATGTGAAGCTGCATTACTGTGTTTCATGTGCTATCCACTCTCATGTTGTGAGGGTTCGTTCCCGCACTGACAGGAGGAAGCGTGACCCACCACAGCGCTTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGACAGCCCGGACAGCCTGGCCAGGGGCCTCGTCCTGCCGGAGTAGGCGCTCCTCCACGTGCCTAA 399 0.5288 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFVVRNIVEQAAVRDVQEACVFEQYTLPKLYVKLHYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQPGQGPRPAGVGAPPRA* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0998 132 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lan3g0998 132 PANTHER 40S RIBOSOMAL PROTEIN S26 1 130 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lan3g0998 132 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lan3g0998 132 PANTHER 40S RIBOSOMAL PROTEIN S26 1 130 - -
Lan3g0998 132 MobiDBLite consensus disorder prediction 90 110 - -
Lan3g0998 132 MobiDBLite consensus disorder prediction 114 132 - -
Lan3g0998 132 MobiDBLite consensus disorder prediction 86 132 - -
Lan3g0998 132 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0998 Lan-Chr3 21726504 21729023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0998 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 81.897 1.64e-67 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0998 K02976 - gmx:100781822 206.838