Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0979 ATGGCAAATTCATTTGAAAATGGAACTGTTTCTGTTTATCATGATTCTTCTGGGTTATTACAAGTTTGTGTCAAAAATGATAGATCTGTTGGATCTCCTGGAATGTTCTATGGTGATAATCCATTTGATTATGTTCTTCCTGTAACGTTGTGCCAAATCTTCATTCATAACATATTATCTCGACTCTTTTCTTTTCTTCTCAAGCCTATAAGAACACCCAAATTCATATGCAACGTCATCGCTGGCATTGCATTAGGGCCATCAGGTCTAGGGCTGAATCAAAAGTATTTCAATGCTCTATTCCCACCAAGACAAACAGAGTTTCTACAAATATCATCCTTAATTGGAGCTTCTTATTATGTCTTTGTCATTACATTGAAAATGGATATAGTAACAACTTTAAGAGCAGCAAAACATACATGGAAACTTGGAGTAATACCGTATCTATCTTCTTTTGGGGTTATAACAGTACTCTTAGGTCTCTATTATAAACTTGAACAAAACCCTCATATCCAAAACCCAGGTGCTCGAACTTTCATTGGTATTTCAATGTCATTCTCTTATTTCCCTGTTATTTCTGAAGCCCTAATGGAATTTAACCTCATAGCCACAGAGATTGGACAAATTGCTTTGTGTTCATCCATGCTCAATGATGTATTGCAATGGGTTATTGTAGCAGCTCAGCGTGTAACAGCTGCTGAAACTGTTAAGAATTCAGTGATGTTCTTCAACATCCATTGCATATTCTTGTTCTTTTGCGTTTTCATCGTACGACCATTGATGAAAATGATTGTTAGAACAACACCGGTTGGGAAACAAGTTAAAGAAATCTATGTTATTGTGATACTTGTTGGTGTTTTAGTTATGGCTGGTCTTAGTGACATTATTGGGATATCAATTTTTATGGGACCTATTCTTCTAGGTTTGATTACACCTAGTGGACCACCATTAGGGACAACATTGATAGACAAATCCGAAGTTATCATATCAAGGTTTATATTACCTTTCTTCTATTTAGATATAGGATTGAACACAGATTTATCTACTCTTCAAAATTGGAAGGAGGTTGTAGTTTTTCAGTGTATCTTACTTGCTGGATACTTGGCTAAGATGATTGCATGTGTGCTTGTTTCGATATCTTACAACATCAAGCCCAAACATGGTGTTATGATTGGCTTCATCATGAATGTTAAGGGTGTCAATGAACTCTTAGCTTTCTCTAGATTGAGGGAACACAAGGGTTTGGGAAATCTAGTGGAGCCGACCACAAAGTTCTTGGATGAACAAACCTTCACTCACTTGGTGATGTGTGTAGTAGTGATGACTGCAATTGTGTCACCCTTTATCAAACTACTATACATGCATCGACCAAGAACACAACATCCATCAATCAATAGTAACTTTGCAGTAAGATCAATCCAAAACACACCAAGTGACACTGAATTTCGAATCATCACATGTTTACATCATGAAGCAAGTGTACGAGGTATGATTGCACTTCTTGAAGCATGTAACCCAATCCTAGAAAGTCCAATATGTGCCTATGTTATTCACCTAGTTGAAATCATGGGTCAAAGTGCACCTATTCTCCTTCCTATAAACTACAAACAAAACAAAAAAATCATGAGTGTTAATTACCCCAACACAAATCATATAATGCGTGCATTTGAGAACTATTCCAACAATGCTAGTGGCCCTATCACTATTCTACCATATGTTAATATTGCACATTACAAACACATGCATGAAGCTATTTGTAACCTAGCACAAGACAAGATTGTACCTTTGATTATCATACCTTTTCATGAGAATGACCATGTTGATCTTGGTGGGCACGTGGCTAAATCAATCCAAAAACTGAATACAAGGTTTCAATCACGTGCTGTTTGCACGGTTGGAATACTAGTGGATAGAGATTCAAAGCTTGGTGGTGATGATTCTATGATGATTTTCCATGTGGGTATTTTCTTTATTGGTGGACAAGATGATAGAGAGGCTCTAGCATTGGGTATTCGAATGGCAAATAGAGAGAATGTTAGGGTTTCATTGTTCAGATTTGTAGTGACAAATATTAATGATAAAGATGATTATAATGGTAGGTTTAAAAGTAGGGAAGAGGAAGAAGAGGAGGAAATAGAAGAAATGTTGAATGAGAGTTTAATTGATGAATTTAAGAGCATGAAATTTGGTAGTGGAAATGTTTCATGGTATGAGATTATGGTGGCTGATGGAGAAGAAATATTGGACACAATAAGAAAATTGGAAGGGAACTATGACCTAGTAATGGTGGGTAGGAGACATAATATTGGAAATTTGAATGATGAGGAATTAACAACTTTTATAGAAAATGCTGAAACTTTGGGAATATTTGGGGATATGTTAGCATCAACAGAGTTTTGTATTGGTATGGTTCCAGTTTTAGTGACACAATGTGGTGGGAATTTGGACACTGAACATAAGTTTAGTAGAGTAGGTTCAGCTACTGTATCTCAAAAAAGTTTGGATATATAG 2511 0.3608 MANSFENGTVSVYHDSSGLLQVCVKNDRSVGSPGMFYGDNPFDYVLPVTLCQIFIHNILSRLFSFLLKPIRTPKFICNVIAGIALGPSGLGLNQKYFNALFPPRQTEFLQISSLIGASYYVFVITLKMDIVTTLRAAKHTWKLGVIPYLSSFGVITVLLGLYYKLEQNPHIQNPGARTFIGISMSFSYFPVISEALMEFNLIATEIGQIALCSSMLNDVLQWVIVAAQRVTAAETVKNSVMFFNIHCIFLFFCVFIVRPLMKMIVRTTPVGKQVKEIYVIVILVGVLVMAGLSDIIGISIFMGPILLGLITPSGPPLGTTLIDKSEVIISRFILPFFYLDIGLNTDLSTLQNWKEVVVFQCILLAGYLAKMIACVLVSISYNIKPKHGVMIGFIMNVKGVNELLAFSRLREHKGLGNLVEPTTKFLDEQTFTHLVMCVVVMTAIVSPFIKLLYMHRPRTQHPSINSNFAVRSIQNTPSDTEFRIITCLHHEASVRGMIALLEACNPILESPICAYVIHLVEIMGQSAPILLPINYKQNKKIMSVNYPNTNHIMRAFENYSNNASGPITILPYVNIAHYKHMHEAICNLAQDKIVPLIIIPFHENDHVDLGGHVAKSIQKLNTRFQSRAVCTVGILVDRDSKLGGDDSMMIFHVGIFFIGGQDDREALALGIRMANRENVRVSLFRFVVTNINDKDDYNGRFKSREEEEEEEIEEMLNESLIDEFKSMKFGSGNVSWYEIMVADGEEILDTIRKLEGNYDLVMVGRRHNIGNLNDEELTTFIENAETLGIFGDMLASTEFCIGMVPVLVTQCGGNLDTEHKFSRVGSATVSQKSLDI* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0979 836 PANTHER CATION/H + ANTIPORTER 4 819 - -
Lan3g0979 836 Coils Coil 698 718 - -
Lan3g0979 836 PANTHER CATION/H+ EXCHANGER 3 4 819 - -
Lan3g0979 836 Pfam Sodium/hydrogen exchanger family 59 448 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lan3g0979 836 Gene3D - 48 461 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0979 Lan-Chr3 21483173 21487086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0979 34 810 Antiporter Super Family AT2G13620 31.910 7.43e-132 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0979 - - gmx:106794183 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0095 15 663414 667608 Lan3g0979 3 21483173 21487086 LSH