Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0974 ATGAGTAGCAAAAACTGGAAATTCAATTTCTTTAAGGATCAAAATGGAGTTCTGTACCTTCTATCTTTGTGTGTATTGCTTCATAGCTTTGGTTTGTGTTGCTCTTTGAATGAAGAAGGTAAAGCACTTTTGAAGTTGAAGGAGAGAATAGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGGTTGATGATGATGATGTAGCAGTTGACCCTTGTAATTGGTTTGGAGTTGAATGCTCAGAAGGCAGAGTGATTGTCTTGAATTTGAAAAACCGTTGTCTTGGAGGAAGTCTAGCACCCGAGGTCATGGGTCTTGTCAACATAAAGTCTATTATTTTGCGGAACAATTCCTTTTATGGATTCATCCCTGCAGGAATTGCACACTTGAAAGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGATGTTTACCTACAGATATTGGGAGTAGTATTTCACTCACAACCCTCTTGCTGGACAACAATTATCTCCTCGGCAGTTTCTCTCCTCAAATTAATAAATTGAAGATGCTTTCTGAACGACAAGTAAACGAAAACCATCTAACTAGTACTGATAAAACGCCAGCTGGCACACGAAGATCCATCAAATGGCATGTTGGTCATAATAGAAAAGTTCATCGGAGCCTGCTGCAATCTCGTATTCATGAACATGATGATATTCATAATCGTGCAACCTATTTTCCCGATATCCCGGCTCCATCCTCTGCGCCATCCCCAGATCCTCTTCCAGCTGCACCACCAGTAGTGCCGAAGCTAGCTCCCCCTGAAAGAACTGATTATGATTCTCCTTCTCCCCTGCCTATTCCTGGTTCTCCAACCCAATCTATAATTCCTTCATCAAAGAATAACAATGTCATTATTATAGCCGGAGTTGGAGGTGGTGTTGTATTTCTTGTCATTTTAGGCATTGGCATATATCTATGTAAAACCGACAAGGTAGCTACTGTAAAACCTTGGGCCACAGGATTAAGTGGACAGCTTCAGAAGGCATTTGTGACAGGCGTGCCGAAGCTAAAGAGATCAGAACTTGAAGCAGCATGTGAAGATTTTAGTAATGTACTCGGTACTTCATCCATTGGCGCAGTGTATAAGGGGACTTTATCTAGCGGTGTTGAAATAGCAGTGGCGTCTGTTTCATTGGATTCATCTAATAATTGGTCAAGGGCTTCCGAAACCCAATTTAGGAAGAAGGTAGATGCATTGTCAAAAGTGAACCATAAGAATTTCGTAAATCTGCTTGGATATTGTAGAGAAGACGAGCCTTTCACCAGAATGGTGGTTTTTGAATATGCACCGAATGGAACACTCTTTGAGCATTTACACATACAAGAAGCCGAGCATTTGGATTGGGGAACGAGACTTCGAGTTGCCATGGGCATGGCTTACTGTCTGCAACATATGCACCAGTTGGAACCTCCTTTGCCACATAGCAACTTGAATTCTTCGGCTGTCCAACTCACCGATGACTATGCCGCCAAAATCTCCGATCTGAGCTTCTTGAATGAAATAGGAAAACCCGATAAAAAATCCCGTGCTAAAAAGCATATCGAAATGACATTAGCAAGTAATGTGTACAGTTTCGGTGTCATACTATTTGAGATGGTAACAGGCAGGCTCCCTTATTCAGTGGATAACAATGGCTCACTCGAAGATTGGGCTTCACACTATTTACAAGGCGACCAGCCGATCAAAGAAATGGTGGATCCAACTCTAGCTTCTATCGATGTCGAAAAGCTTGAACAAGTTGCTGTTTTGATTAAATCTTGTGTCCACCAAGATCCACAGCAGAGACCAACAATGAAAGAAGTTAGTGTCAAGTTGAGAGATATAACAAACATAACACCTGAAGCAGCTGTTCCAAAGCTATCTCCACTTTGGTGGGCAGAACTAGAGATTGGTTCTGCAGATGCATGCTGA 1944 0.4198 MSSKNWKFNFFKDQNGVLYLLSLCVLLHSFGLCCSLNEEGKALLKLKERIVSDPFGALSNWVDDDDVAVDPCNWFGVECSEGRVIVLNLKNRCLGGSLAPEVMGLVNIKSIILRNNSFYGFIPAGIAHLKELEVLDLGYNNFSGCLPTDIGSSISLTTLLLDNNYLLGSFSPQINKLKMLSERQVNENHLTSTDKTPAGTRRSIKWHVGHNRKVHRSLLQSRIHEHDDIHNRATYFPDIPAPSSAPSPDPLPAAPPVVPKLAPPERTDYDSPSPLPIPGSPTQSIIPSSKNNNVIIIAGVGGGVVFLVILGIGIYLCKTDKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVLGTSSIGAVYKGTLSSGVEIAVASVSLDSSNNWSRASETQFRKKVDALSKVNHKNFVNLLGYCREDEPFTRMVVFEYAPNGTLFEHLHIQEAEHLDWGTRLRVAMGMAYCLQHMHQLEPPLPHSNLNSSAVQLTDDYAAKISDLSFLNEIGKPDKKSRAKKHIEMTLASNVYSFGVILFEMVTGRLPYSVDNNGSLEDWASHYLQGDQPIKEMVDPTLASIDVEKLEQVAVLIKSCVHQDPQQRPTMKEVSVKLRDITNITPEAAVPKLSPLWWAELEIGSADAC* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0974 647 MobiDBLite consensus disorder prediction 241 262 - -
Lan3g0974 647 SUPERFAMILY L domain-like 38 195 - -
Lan3g0974 647 Pfam Protein tyrosine and serine/threonine kinase 359 615 IPR001245 GO:0004672|GO:0006468
Lan3g0974 647 ProSiteProfiles Protein kinase domain profile. 357 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0974 647 Gene3D Phosphorylase Kinase; domain 1 329 439 - -
Lan3g0974 647 Gene3D Ribonuclease Inhibitor 34 227 IPR032675 -
Lan3g0974 647 Gene3D Transferase(Phosphotransferase) domain 1 440 628 - -
Lan3g0974 647 PANTHER BNAA09G55080D PROTEIN 3 646 - -
Lan3g0974 647 MobiDBLite consensus disorder prediction 234 284 - -
Lan3g0974 647 Pfam Leucine rich repeat N-terminal domain 37 80 IPR013210 -
Lan3g0974 647 PANTHER PROTEIN MALE DISCOVERER 2 3 646 - -
Lan3g0974 647 SUPERFAMILY Protein kinase-like (PK-like) 340 613 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0974 Lan-Chr3 21435348 21439644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0974 19 612 Receptor kinase-like Gene Family AT5G16000 25.760 1.95e-53 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lan3g0974 PK_Tyr_Ser-Thr 1.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0974 - - gmx:100784541 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0165 14 2051205 2055664 Lan3g0974 3 21435348 21439644 LSH