Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0971 ATGAAGGTCACTGTTGTGTATAACCATTTTGGACCTAATTGCAACCAACGCATGCCAAGGATTCGACATGGANATGCACATGTGGCCAATAATCTTTACCTTGGATGGTTGCAATATGCCATTGGTGGAAGCATGGAACCCAGCCTCAAAAGTGAAGCAAATCTCTTCATTGCACCAAAATCTGGGAGCAGGGAGGTGACATGGAGGAAAAGCAATGGCCACAATGGGGAAACATGGAAATTTCACTCAGTAAAAGACATTTTTGAAAACGGAGCATCCTTCATGGCAACGAAAGGTGGACATGTACAAAAGCCAAATTATACCATGGAACAAAGTTTTATAGTTTCTGATGCCAAATCTGTGAGATCGTTGACAAGTTCATCAGGAGCATTACGATGCAGTAAAACTTCTGTATGCTGA 420 0.419 MKVTVVYNHFGPNCNQRMPRIRHGXAHVANNLYLGWLQYAIGGSMEPSLKSEANLFIAPKSGSREVTWRKSNGHNGETWKFHSVKDIFENGASFMATKGGHVQKPNYTMEQSFIVSDAKSVRSLTSSSGALRCSKTSVC* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0971 139 PANTHER PECTATE LYASE 1 136 - -
Lan3g0971 139 PANTHER PECTATE LYASE 18-RELATED 1 136 IPR045032 GO:0030570
Lan3g0971 139 Gene3D - 1 132 IPR012334 -
Lan3g0971 139 PRINTS Pollen allergen Amb family signature 17 36 IPR018082 -
Lan3g0971 139 PRINTS Pollen allergen Amb family signature 39 58 IPR018082 -
Lan3g0971 139 PRINTS Pollen allergen Amb family signature 79 103 IPR018082 -
Lan3g0971 139 PRINTS Pollen allergen Amb family signature 110 133 IPR018082 -
Lan3g0971 139 SUPERFAMILY Pectin lyase-like 1 130 IPR011050 -
Lan3g0971 139 Pfam Pectate lyase 2 56 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0971 Lan-Chr3 21416328 21417274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0971 1 139 Polysaccharide Lyase AT4G22080 47.857 3.36e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0971 K01728 - gmx:100780437 235.343