Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0968 ATGAAGGGTTATGAGTCCCGTTCAAGTTCTTCTTGTGCAGCTTGCAAATTATTGAAAAGAAGGTGCACCCCAAATTGTGTTTTTGCACCTTACTTTCACTCAGATGAGTGCAACAAATTTGCCAAAGTCCACAAGGTATTTGGAGCCAGTAATGTAAGTAAGATCCTCATTGAAGTGCCACAAGAACATAGAGAAGACACTGTTAATTCTCTTGCATTTGAGGCAGAAGCAAGGCTTAGAGACCCAGTTTATGGATGCATTGGTGACATAGTACTTTTGCAAATGAAGATGGTTGATCTTCAACATGATTTGGCCATTGCTAAGGATCGTTTAGCCCGTTGTGCCGCCGCTACGGCCACCGCGACAACCACCACTTCTGATGATGTTTTGCATGCTACCCATGCTAGTTTGCCTCATTTACGTGGGTTTTCTACTAGTAATGATTTCAATGATAGTTTATGCCACGGCTCTTCTTCATCTGAGTTATTGAGAAGACATGAAATAATGGATGATTGCATTGAAATCCCATATATACTTTAG 540 0.4111 MKGYESRSSSSCAACKLLKRRCTPNCVFAPYFHSDECNKFAKVHKVFGASNVSKILIEVPQEHREDTVNSLAFEAEARLRDPVYGCIGDIVLLQMKMVDLQHDLAIAKDRLARCAAATATATTTTSDDVLHATHASLPHLRGFSTSNDFNDSLCHGSSSSELLRRHEIMDDCIEIPYIL* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0968 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 159 - -
Lan3g0968 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 159 - -
Lan3g0968 179 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lan3g0968 179 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0968 Lan-Chr3 21378886 21379535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0968 1 111 AS2 family AT3G11090 73.874 1.24e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan3g0968 LOB 1.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0968 - - gmx:100791250 241.506