Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0965 ATGGACCATTCCTCTTCTTCTCTTCACCCTCCCCAAGAAACAAAACACACTAACCCTTCTACCAAAACCATTGAAACATCATCAAACACTTCCAAAGGTAAGTGTAAAGTTAAAGGTAAAGGTGGACCTGATAACAACAAATTCAAGTACCGTGGTGTTAGACAAAGAAGCTGGGGAAAATGGGTTGCTGAGATCCGAGAACCAAGAAAAAGAACAAGAAAGTGGCTTGGAACTTTTTCTACTGCTGAAGATGCTGCTAGAGCTTATGACCATGCAGCAATTATTCTCTATGGTTCTAGGGCTCAACTTAATCTTCAACCATCAGGTTCTTCTAATTCTCAATCTTCTTCTCGTGCTTCTTCTTCCACTCATACCCTTCGTCCTTTGCTACCTCGACCTTCTGGTTTTGCTTTCACTTTTTCCAATTCCATCAATAATTCTCATCATTTTCCTCAAGTTTTTAACTCCACCGCCACATCAGGGTTCATTCCTTATGGGGTTTATTCCGGTGGCGGCGGTGTTGAGAACAATAATACAAATATGGGTACAAATCCTGTGTTGTGCCCTATTAGTAACAACATAGTACAGCAATATCATCAAGCTCAATTTAATTCTCATTGTCATTCACAACAAGTTGTGCTAGTGCAACAAGAACAACAACAGCAGCAACAACAAGAAGAACCTGGTGAATTAGTTATTGGTCATAATCATACCGGATCCGGAAAAGAAACCTCGTACAAGAACAACACAATCCATCAACATCATAATCATCTTGTACATAGTGATACTAATGTTGTGTCTAATAATCAACTTGATGAGCAGCATCAGAATTGCATGTACGATTTGGTGGGCTCTGTTGGGTCAAGCTTGTCATCTTCTTTAACTATATCTGTTCCTGTGGAGAATTCTGAGTCTCAAATGGGTATAGGAGTTGGATCTCCTACTTCATTTATGTGGCCAATGCCAATGGAGGAAGATGATTACCCAGCTAATTTGTGGGATTATAATGAATCTTTCTTCTTGGATTTTTGA 1032 0.3953 MDHSSSSLHPPQETKHTNPSTKTIETSSNTSKGKCKVKGKGGPDNNKFKYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDHAAIILYGSRAQLNLQPSGSSNSQSSSRASSSTHTLRPLLPRPSGFAFTFSNSINNSHHFPQVFNSTATSGFIPYGVYSGGGGVENNNTNMGTNPVLCPISNNIVQQYHQAQFNSHCHSQQVVLVQQEQQQQQQQEEPGELVIGHNHTGSGKETSYKNNTIHQHHNHLVHSDTNVVSNNQLDEQHQNCMYDLVGSVGSSLSSSLTISVPVENSESQMGIGVGSPTSFMWPMPMEEDDYPANLWDYNESFFLDF* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0965 343 MobiDBLite consensus disorder prediction 218 247 - -
Lan3g0965 343 Pfam AP2 domain 49 97 IPR001471 GO:0003700|GO:0006355
Lan3g0965 343 MobiDBLite consensus disorder prediction 37 51 - -
Lan3g0965 343 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Lan3g0965 343 SUPERFAMILY DNA-binding domain 49 106 IPR016177 GO:0003677
Lan3g0965 343 Gene3D AP2/ERF domain 48 106 IPR036955 GO:0003700|GO:0006355
Lan3g0965 343 MobiDBLite consensus disorder prediction 1 51 - -
Lan3g0965 343 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 11 341 - -
Lan3g0965 343 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Lan3g0965 343 MobiDBLite consensus disorder prediction 105 128 - -
Lan3g0965 343 CDD AP2 49 106 IPR001471 GO:0003700|GO:0006355
Lan3g0965 343 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABI4 11 341 - -
Lan3g0965 343 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Lan3g0965 343 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Lan3g0965 343 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0965 Lan-Chr3 21306173 21307904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0965 12 343 AP2-EREBP Transcription Factor Family AT2G40220 40.056 2.66e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan3g0965 AP2 2.9e-12 CL0081