Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0957 ATGTACGTTGAATCCAAGCATCAGGAGAATGTTGTTAAAATTCGATGCCATCAACCTGAATGTGAAGTTGGGCTATTGGAGCTTCAACGTTGTCGTGGAATTCTTCCTAAGGAAATGTTTGATCGTTGGGGTGATGCTTTGCGGGAGGCTAAGATTCTTGAAAATGAGAAATTATATCGTCCTTATAAATATTGCGTTGCACTTATGGTTAACGATGGCGGAGAGTTGGTGAAGGAATCTGAGTGCCCTAATTGTAGGAGATTTTTCTGTGCACAGAGTAAGGTTTTGTCGCATGATGGTATTGAGTGTGATGATTTTCAGAAACTGAATAAGGATGAGAGAGAAAAGGAAGATATCATGTTTATGCAACTTGCAAATAATAACAAGTGGAGGAGATGTCTAAAGTGCAGGATCTTCGTTGATAAATCTCATGGGTGCATGTACTTGAAATATAGTGGCTTGAACAATGGAGATTGCCATATTCTCAAATCTGGCTTAATTCGTACAGTACCAGATAGCAGAAGTAGAATTAAGAATGCAAGCAACCAAGTCCTATTTCAATTGAGGACTCCACCTGCTAGAAATTAG 588 0.3912 MYVESKHQENVVKIRCHQPECEVGLLELQRCRGILPKEMFDRWGDALREAKILENEKLYRPYKYCVALMVNDGGELVKESECPNCRRFFCAQSKVLSHDGIECDDFQKLNKDEREKEDIMFMQLANNNKWRRCLKCRIFVDKSHGCMYLKYSGLNNGDCHILKSGLIRTVPDSRSRIKNASNQVLFQLRTPPARN* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0957 195 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 2 151 IPR031127 GO:0004842|GO:0016567
Lan3g0957 195 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 2 151 - -
Lan3g0957 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 53 IPR013083 -
Lan3g0957 195 ProSiteProfiles TRIAD supradomain profile. 1 185 IPR044066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0957 Lan-Chr3 20897658 20918548 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0957 K11975 - twl:120005643 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0200 15 2159325 2161179 Lan3g0957 3 20897658 20918548 LSH