Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0903 ATGGTTATCCATTCTTCATATTTTTTACACACACAAAACCAACAAGCACACATGAAGGTGTACATAATTTTGAGGCAAGGAAAAATACAAAGAAGAGTATATAATCAGATTAGCAGTATCATAAATATCAGTATCACCATGCCGAAAGCAAGTTGTGACGCCAAACCCGCCGATACCCGGTTAAAGCGCAAGGGCGCTGGAATTGCGAGGGAGCAAACTAAGAAAGCTGCTAAAGATCCAAACAAGCCTAAGAGGCTTCAAAGCGCTTTCTTCGTTGTCATGGCTGAGTTCAGAGAGGAATTCAAGAAGGAGAACCCAAACAACCAATCTGTCACCACTATTGGTAAAGCTTGCGGTAGTGAATGGAAAGAGATGAATGATGCTGAAAAAGCTCCATACGTTGCTAAGGCTGTGAAGAAGAAAGAGGAGATTGGAGAAGACGGCTTTGTGACTATGTCGTTGTCAATCGTCTCAACTCCTTGCCAGCATGGAACTAGGATGTCACGTGTGAGAAGGAAGAGAGAGATGCATCGCCTAAGGATGAAACCAACCCGGATAGACTTACAAAGAATGGAGGGAGAAGGACACCCATGCCAACATTGGAATTCGTCTCAACCATAA 621 0.4348 MVIHSSYFLHTQNQQAHMKVYIILRQGKIQRRVYNQISSIINISITMPKASCDAKPADTRLKRKGAGIAREQTKKAAKDPNKPKRLQSAFFVVMAEFREEFKKENPNNQSVTTIGKACGSEWKEMNDAEKAPYVAKAVKKKEEIGEDGFVTMSLSIVSTPCQHGTRMSRVRRKREMHRLRMKPTRIDLQRMEGEGHPCQHWNSSQP* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0903 206 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 50 144 IPR031061 -
Lan3g0903 206 Pfam HMG (high mobility group) box 83 144 IPR009071 -
Lan3g0903 206 CDD HMGB-UBF_HMG-box 83 143 - -
Lan3g0903 206 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 83 143 IPR009071 -
Lan3g0903 206 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 50 144 - -
Lan3g0903 206 SMART hmgende2 82 149 IPR009071 -
Lan3g0903 206 SUPERFAMILY HMG-box 71 143 IPR036910 -
Lan3g0903 206 Gene3D High mobility group box domain 67 147 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0903 Lan-Chr3 18174105 18175063 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Lan3g0903 HMG_box 3.2e-16 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0903 K25507 - lang:109342596 389.423