Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0901 ATGGGGAAGCCAGAAGATGAACAACAACCTCTTCCTTCCGGCGAGGATCCGCCGCAGAATGCGGTGGCCGAGTGTCGGTGTTCTTGGTTTCGGAAAGTCGTTGGTTTCAGATGCATTCTCGAAATCTTATTCTCTGTTGCTGTTTTCCTTTCTGCTTTGTTTTTGTTGCCACCCTTTCTTGACCTCGCAGATCAGAATAATCTACATGGTGATTCCAGATATAAAGATCATGATATTGTTGCAAGCTTTATTATCAATAAGTCAGTCGCTTTGCTAGAAGACAACGCCCCACAGCTCGCATACGAAATTTTTGATGAGATAGAAGCTCCCTCTACCAAAGTGGTCATCTTGTCGCTTGATCCCATACATAAGTCAAACATGACAAAAGTGGTGTTTGCGGTTGATCCTGATGGTAAATACTCAGAGATGTCTTCAACTGACATTAGTTTGATAAGGGCATCATTTCAATCCCTTGTTATACGTCAATCGCATCTCCAGCTTACATCTTCGTCGTTGTTTGGCAAACCCTCCTTTTTTGAAGTGCTGAAATTTAAGGGAGGAATTACTATAATTCCACAGCAGAGTGCTTTTCCTCTGCAGACAGTGCAAACACGATTCAACTTTACTTTGAATTTCTCCATTTATCAAATACAATTAAATTTCAATGAGCTGACGAGTCAGCTTAAGTCTGGATTAGAACTAGGATCCCTTGAGAACTTGCAAGTCATCCTATCAAATTCTGAAGGTTCAACGGTAGCTCCTCCTACTGTCGTTCAGTCAACCGTTGTACTTGCAGTTGGAATTAATCCAACAAAAAAGAGGATGAAGCAACTGGCTCAAACCATCATGGGACGCCGTAATCTTGGCTTGAATAACACTGAATTTGGTAGGGTAAAGCAGGTCCATCTTTCATCCATCTTGAACCACTCCCTTCATGGCAATGATGGTAGTGGCTCTGCTTGGTCTCCTGCTCCTGCTCCCCTGCCTCATCCACCACACCACCACCACCATCATCGGCATCATCATCACCATCACCATGATGGCCATCTAACTCCTGCAGTTTCTCCTATACCTGCACCTACAACTGGGGCCGGTGGAACATCACCTGAGGCAGGTTCTCCTGCTGCTACAAAACATGTGCCTGCACTGGGGAAACGTTCTCGAGGTCAGCCTCCTAATTGTCAATTTGGGCATAGAAGGAGTTCTACCCATAATGCTGGGAAGCATGCTCATCAAACACCCACAGTTGCCCCTAGTATCCATCCACATTATCATGTTCCTGTTGCCTCGCCAAAACCACAGGTTGAACCCCCAGCACATGTCTCTCATTCAATACCCAGTCCTGTTCCTGATGTCTCACCAAGACCACACGTTGAACTCCCTGCACGTGGCTTTCATTCGGTACCTGCTTTGAGTCCGTTACCAAATGTAGCCTTTGCTCATGCTGAGCCCCCTCCTGCGAATCCTAAGAATGCACCAGATGGAGAACGTTCTCACACAGATTTTCATGGGTCATCATCAGTTACATCTTCAGCAGGTTGTGTTAGAACTCTCAAATGGGCATCTATAATGTTAATAGTACTTGTGTTACATGTATAA 1599 0.4503 MGKPEDEQQPLPSGEDPPQNAVAECRCSWFRKVVGFRCILEILFSVAVFLSALFLLPPFLDLADQNNLHGDSRYKDHDIVASFIINKSVALLEDNAPQLAYEIFDEIEAPSTKVVILSLDPIHKSNMTKVVFAVDPDGKYSEMSSTDISLIRASFQSLVIRQSHLQLTSSSLFGKPSFFEVLKFKGGITIIPQQSAFPLQTVQTRFNFTLNFSIYQIQLNFNELTSQLKSGLELGSLENLQVILSNSEGSTVAPPTVVQSTVVLAVGINPTKKRMKQLAQTIMGRRNLGLNNTEFGRVKQVHLSSILNHSLHGNDGSGSAWSPAPAPLPHPPHHHHHHRHHHHHHHDGHLTPAVSPIPAPTTGAGGTSPEAGSPAATKHVPALGKRSRGQPPNCQFGHRRSSTHNAGKHAHQTPTVAPSIHPHYHVPVASPKPQVEPPAHVSHSIPSPVPDVSPRPHVELPARGFHSVPALSPLPNVAFAHAEPPPANPKNAPDGERSHTDFHGSSSVTSSAGCVRTLKWASIMLIVLVLHV* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0901 532 MobiDBLite consensus disorder prediction 479 509 - -
Lan3g0901 532 MobiDBLite consensus disorder prediction 394 412 - -
Lan3g0901 532 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 531 - -
Lan3g0901 532 MobiDBLite consensus disorder prediction 315 413 - -
Lan3g0901 532 PANTHER F20B24.21 1 531 - -
Lan3g0901 532 MobiDBLite consensus disorder prediction 330 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0901 Lan-Chr3 18112555 18119973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0901 1 307 C3H Transcription Factor Family AT3G10810 53.968 1.09e-90 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0901 - - gmx:100792490 605.134