Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0895 ATGGTTTCTGTGTCTAAACCCATGGGTTTCACTTTCACCTTGTTCTTGAACATCTCCTTCATCATGGTGTTATGTGCTTTTGTGATTTTTCACTTCCACTCTTCAGAAAAAGATATTGTTCTGAGAAATCACTTTACCTTTGGTGGCAGTAGTAGTGAGAAGGATTGTAAGGGTTTACATAGTCTAAGTGATTATAAAGCTAAGTGCTTTTATGTGAAATCCAATGACCCATGTGTCTCTCAGGGCTATGTTGACTACCTATACCTTTACTATTGCAAATTTGGGGAATTCCCTTTATTGGGTCACACCCTTTTGTTTCTTTGGCTCCTAGTTCTGTTCTATCTTTTGGCCAATACAGCTTCAGAATACTTTTGTCCTTCCCTTGAAAACTTGTCCAATTTGCTGAGGTTGTCCCCTACAATTGCTGGGGTGACCCTTCTCTCTCTTGGCAATGGTGCCAGTGATGTTTTTGCCACCCTTGTCTCTTTCAATGGTAGTGGGACACATGGAATTGGCTTTAACACTGTGCTAGGGGGTGCTTCCTTTGTGTCCTGTGTTGTGGTTGGAATTGTGAGTATATCAATTCGTGGTAGGGGAATTCGCGTCAAGAAGTCTGCATTGGTAAGGGATGTTTGTTTCTTACTCTTGGTTCTGTTGTGCTTGTTCACCATTTTGGTGAGTGGTGAGATCAATGTTTTTGGAGCAATTGGTTTCTGTTTGATGTATGTGGTGTATGTGGTTGTTGTTTATATCTCGTCCACACGGTGGAAGGGTGTCTGTGGTGATGCTGAAATTGATGGTGATTCAAGGCATGGCTGTGATTTAAGTGTGCCTCTTCTCAGTGGGATGGAGAAAGGACTAATTGGTGCTGAAAATGGAGCTCAAGAATGCGACATGAAAATTGATAAGACATGCAGCTCTAAGAAATTTTCAGTATGTGGAACATTACTTCATGTCTCGGAGATGCCACTCTACTTGCCTAGAAGATTAACAATTCCCGTTGTTTGTGAAGACAGATGGTCGAAGCCGTATGCAGTTTGTTCAGCTATGCTAGCACCAATTCTCTTGTCTTCGTTGTGTACCTCAAACAAGGAGAATATTTTCTCCATCTTAAACCTTATAATTTATGGAATTGGCTTTTTGGTTGGAACTATATTAAGCGTAATTGCATTTTTCGCGACCGAGATGTCAAGTCCGCCAAAGAATTACTTGCTCCCTTGGCTCGTTGGCGGATTCGCGATGAGTGTGTGTTGGAGCTACATTTCAGCCAAGGAATTAGTTGCATTGTTGGTTTCACTTGGTTACATATGTGGGGTAAGTCCTTCAATATTGGGGTTAACAGTTCTTGCATGGGGAAATTCACTTGGGGACCTGATCACAAATTTAACAATGGCCTTAAATGGTGGACCAAAAGGTGCTCAAATTGCAATATCAGGTTGTTATGCTGGCCCTATCTTCAATACAGTTATTGGATTAGGCTTATCTCTTGTGTTCTCTACTTGGTCACAGTATCCATCATCTGTTATGATACCTAGAGATCCATATTTGTGGGAGACATTAGCATTTTTGGTGGTTGGGTTGGTTTGGGCACTTGTGGTATTAATAAGAAGAGATATGAAGCTTGATGCAGTCTTAGGAGGAGGGCTTTTAGTTGTTTACTTCATTTCTCTGTTTCTGAGGCTGATTCAAACTCTTGGTACTCTTCAATTTCAGGATATGTTAACCTTAGTCTTGAAAAGATGA 1743 0.4102 MVSVSKPMGFTFTLFLNISFIMVLCAFVIFHFHSSEKDIVLRNHFTFGGSSSEKDCKGLHSLSDYKAKCFYVKSNDPCVSQGYVDYLYLYYCKFGEFPLLGHTLLFLWLLVLFYLLANTASEYFCPSLENLSNLLRLSPTIAGVTLLSLGNGASDVFATLVSFNGSGTHGIGFNTVLGGASFVSCVVVGIVSISIRGRGIRVKKSALVRDVCFLLLVLLCLFTILVSGEINVFGAIGFCLMYVVYVVVVYISSTRWKGVCGDAEIDGDSRHGCDLSVPLLSGMEKGLIGAENGAQECDMKIDKTCSSKKFSVCGTLLHVSEMPLYLPRRLTIPVVCEDRWSKPYAVCSAMLAPILLSSLCTSNKENIFSILNLIIYGIGFLVGTILSVIAFFATEMSSPPKNYLLPWLVGGFAMSVCWSYISAKELVALLVSLGYICGVSPSILGLTVLAWGNSLGDLITNLTMALNGGPKGAQIAISGCYAGPIFNTVIGLGLSLVFSTWSQYPSSVMIPRDPYLWETLAFLVVGLVWALVVLIRRDMKLDAVLGGGLLVVYFISLFLRLIQTLGTLQFQDMLTLVLKR* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0895 580 Gene3D - 347 561 IPR044880 -
Lan3g0895 580 Gene3D - 137 263 IPR044880 -
Lan3g0895 580 Pfam Sodium/calcium exchanger protein 408 560 IPR004837 GO:0016021|GO:0055085
Lan3g0895 580 Pfam Sodium/calcium exchanger protein 106 250 IPR004837 GO:0016021|GO:0055085
Lan3g0895 580 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 3 569 - -
Lan3g0895 580 PANTHER CATION CALCIUM EXCHANGER 3 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0895 Lan-Chr3 17824603 17826802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0895 8 566 Antiporters AT5G17850 53.076 5.75e-169 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0895 K13754 - gmx:100787016 778.089