Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0868 ATGCTGCATGAAAAGTTTAGAAAGGGAACAACAAAGGTTGAATATAGCAGCCAAGAAGAGAAACTAAGCAGTGAAAATTTGTTGCTGATGGGTCTAAGTTTGAAGATGCAGATTCATCAAAACCCTGTGGCTTTGAGGATGCATGAGCAAAGTGGGAATAAAGGGAAGTACACTTTCATTCAAGCTCATAGAGCTTGGCTTTCAAAGTTTCTGCTTTTTTGGATCACGCTCATGGCTTTAATCAGTTGGTGCATCTATAGTAACATGGATGCTGACACCAAAGTGAGAAGGAGAGAAGCTCTTGGTAGCTTATGTGATCAAAGAGCTAGAATGTTGCAAGATCAATTCAGTGTTAGTGTTAACCATGTTCATGCCCTTGCTATCCTTGTTTCAACCTTCCATTACTATAGAAGCCCTTCTGCCATTGACCAGGAAACCTTCATGGAGTATACTGCCAGGACAGCATTTGAAAGGCCGTTACTGAGTGGGGTAGCCTATGCACAAAGAGTGGTTAACTCGGAAAGAGAAAGATTTGAGATGCAACATGGATGGGTTATAAAGACAATGCAAAGAGAGCCTTCACAGATTCGAGATGAGTATGCGCCGGTGATATTTGCACAAGAAACTGTCTCATACCTTGAATCTATTGATATGATGTCTGGGGAGGAGGACCGAGAAAACATTTTGAGAGCTAGGGCAACAGGGAAAGCTGTTCTGACTAGCCCCTTCAGACTGCTGGGCTCTCATCATCTTGGTGTGGTTTTGACATTTCCTGTTTACAAATCTAAGCTCCCTCCGAAGCCAACAGTCGAAGAGCGCATTAAAGCAACAGCAGGATATGTTGGAGGGTCCTTTGATGTTGAGTCCCTTGTGGAGAATTTACTCGGTCAACTTGCTGGAAACCAAGCAATTTTGGTACATGTATATGATGTCACGAACTCAACTAACCCCCTAATCATGTACGGTAACCAATATGAAGAAGGCGATGGGTCTCTTATCCATGAAAGCAAGCTTGATTTCGGAGATCCATACAGGAGACATCAGATGATATGTAGGTATCACCAGAAAGCACCGACAAATTGGATAGCACTTACCACGGCATCTCTATTCTTCATTATTCTTTTATTAGTCGGTTACATTTTATATGGTGCTGGGAATCATATTGTCAAAGTAGAAGATGATTTCCACGAAATGCAGGAATTGAAAGTCCGAGCAGAAGCAGCCGATGTCGCCAAGTCACAGTTTCTTGCTACTGTCTCTCATGAAATCAGAACACCAATGAACGGGATTTTAGGAATGCTTGGTTTGCTTCTAGATACAGAATTGAGTTCTACGCAAAGAGATTATGCTCAGACTGCTCAAGCATGTGGGAAGGCTCTGATAGCATTAATAAATGAAGTGCTCGACCGGGCGAAGATTGAAGCTGGCAAGTTAGAGCTTGAAGCAGTTCCATTTGACCTTCGTTCCATACTCGACGATGTCCTTTCACTTTTTTCTGAGAAGTCTAGACATAAAGGTTTAGAGCTGGCAGTGTTTGTTTCTGATAAAGTACCACATATTGTAATGGGAGATCCTGGGAGGTTCAGACAAATAATAACAAATCTTGTTGGCAACTCTGTTAAATTCACGGAACGAGGACATATATTTGTTAAAGTCCATCTTGCCGAAAATCGAAAGTCAACAATGAATGGAAAGTCTGAGATGTTTCTAAATGGAGGACCAGATGAAGTTTTACATACTTCTGGTGGTTATCATTCCAAAACCTTAAGTGGATGTGAAGCTGCAGATGAACGGAATAATTGGGATAATTTTAAGCATCTTATTGCTGATGAAGAATTTTTCTTTGACGCCTCAATTAAAAAGACAGCCTCGAGCGAGTCCTATGAGCAAATCACCTTGATGGTGTGTGTTGAGGACACTGGAATTGGAATTCCATTCTCAGCACAAGATAGTATATTCATGCCTTTTGTGCAAGCAGACAGCTCAACCTCTCGAAACTATGGCGGCACAGGCATTGGCTTGAGTATCAGTAAGTGCCTGGTTGAACTAATGGGTGGAAAGATAAACTTCATAAGCCGACCGCAGGTTGGTAGCACATTTTCATTTACGGCAGATTTTGGAATGTTTAACAATCCAACGACTGATGTGAAGAAACATAATTTGGAGGATCTGCCTTCTAGTTTTAGAGGGCTTAAAGCCATAGTGGTTGATGGAAAACCTGTTAGAGCTGCTGTGACTAGATACCATTTGAAGAGACTGGGGATACAAGCTAAAGTTGCAAATAACATCAATAAGGCTGTTTCTTTATGTGGGAAAAATGGTTCTTTGACCTCGGCATTATTTCAACCTGATATTATTATCGTCGAAAAGGATTCATGGGTTTCCGGAGAGGATGGGATATTCTTCAATGTGTGGCAACTGGACTGGAAGCAGAATGGTCATGTGTTTAAGATGCCTCAAATGATCCTTCTTGCCACCAATATCAGTAATGCTGAATTCGACAATGCGATAGCTGCAGGTTTCTCGGATACAGTGATCATGAAGCCTCTGAGAGCTAGTATGGTGGCTGCTTGTCTTCAGCAAATTCTTGGGATGGGGAAGAAGAGGCAGTTAGGGAAAGACAACCCTAATGGTTCTACTTTTCTACGAAGCATTCTTTCCGGGAAGAAAGTTTTAGTTGTTGATGACAATGTGGTAAACCGGAGGGTCGCTGCAGGCGCGTTAAAGAAGTTTGGAGCTGAGGTGAAGTGTGCAGAAAGTGGCAAATCTGCCCTTGAAATGCTTCAATTGCCTCACAGTTTTGATGCTTGCTTCATGGACATTCAAATGCCCGAAATGGATGGGTTTGAAGCAACACGGCGAATTCGGAAGATAGAGAGCAAGGCAAATGAGGAGATGAATAGTGAATGTATTGAAGGAGGAAATGGCATGAAAAGCGAGTTCCATATTCCAATATTGGCCATGACAGCCGATGTAATCCATGCAACATATGACGAGTGCTTGAAATGTGGAATGGATGGATATGTCTCAAAGCCCTTTGAAGAAGAGAATCTGTATCAAGAAGTTGCAAGGTTTTTCATGACCAAACCTATGTTAGACTCATAA 3105 0.4196 MLHEKFRKGTTKVEYSSQEEKLSSENLLLMGLSLKMQIHQNPVALRMHEQSGNKGKYTFIQAHRAWLSKFLLFWITLMALISWCIYSNMDADTKVRRREALGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRSPSAIDQETFMEYTARTAFERPLLSGVAYAQRVVNSERERFEMQHGWVIKTMQREPSQIRDEYAPVIFAQETVSYLESIDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPPKPTVEERIKATAGYVGGSFDVESLVENLLGQLAGNQAILVHVYDVTNSTNPLIMYGNQYEEGDGSLIHESKLDFGDPYRRHQMICRYHQKAPTNWIALTTASLFFIILLLVGYILYGAGNHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLGLLLDTELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPHIVMGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAENRKSTMNGKSEMFLNGGPDEVLHTSGGYHSKTLSGCEAADERNNWDNFKHLIADEEFFFDASIKKTASSESYEQITLMVCVEDTGIGIPFSAQDSIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGKINFISRPQVGSTFSFTADFGMFNNPTTDVKKHNLEDLPSSFRGLKAIVVDGKPVRAAVTRYHLKRLGIQAKVANNINKAVSLCGKNGSLTSALFQPDIIIVEKDSWVSGEDGIFFNVWQLDWKQNGHVFKMPQMILLATNISNAEFDNAIAAGFSDTVIMKPLRASMVAACLQQILGMGKKRQLGKDNPNGSTFLRSILSGKKVLVVDDNVVNRRVAAGALKKFGAEVKCAESGKSALEMLQLPHSFDACFMDIQMPEMDGFEATRRIRKIESKANEEMNSECIEGGNGMKSEFHIPILAMTADVIHATYDECLKCGMDGYVSKPFEEENLYQEVARFFMTKPMLDS* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0868 1034 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 523 706 IPR003594 -
Lan3g0868 1034 SUPERFAMILY CheY-like 728 864 IPR011006 -
Lan3g0868 1034 SMART HisKA_10 411 476 IPR003661 GO:0000155|GO:0007165
Lan3g0868 1034 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 465 703 IPR036890 -
Lan3g0868 1034 CDD HATPase_EvgS-ArcB-TorS-like 528 706 - -
Lan3g0868 1034 Gene3D - 89 141 - -
Lan3g0868 1034 SMART REC_2 889 1022 IPR001789 GO:0000160
Lan3g0868 1034 ProSiteProfiles Response regulatory domain profile. 732 863 IPR001789 GO:0000160
Lan3g0868 1034 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 397 477 IPR036097 GO:0000155|GO:0007165
Lan3g0868 1034 SMART CHASE_2 138 323 IPR006189 -
Lan3g0868 1034 ProSiteProfiles Histidine kinase domain profile. 418 708 IPR005467 -
Lan3g0868 1034 CDD REC_hyHK_CKI1_RcsC-like 901 1022 - -
Lan3g0868 1034 PANTHER HISTIDINE KINASE 4 52 1029 - -
Lan3g0868 1034 PRINTS Bacterial sensor protein C-terminal signature 633 647 IPR004358 GO:0016310|GO:0016772
Lan3g0868 1034 PRINTS Bacterial sensor protein C-terminal signature 651 661 IPR004358 GO:0016310|GO:0016772
Lan3g0868 1034 PRINTS Bacterial sensor protein C-terminal signature 668 686 IPR004358 GO:0016310|GO:0016772
Lan3g0868 1034 PRINTS Bacterial sensor protein C-terminal signature 692 705 IPR004358 GO:0016310|GO:0016772
Lan3g0868 1034 Pfam Response regulator receiver domain 891 1022 IPR001789 GO:0000160
Lan3g0868 1034 SMART HKATPase_4 523 708 IPR003594 -
Lan3g0868 1034 Gene3D - 385 474 - -
Lan3g0868 1034 Gene3D - 876 1026 - -
Lan3g0868 1034 Pfam CHASE domain 141 321 IPR006189 -
Lan3g0868 1034 Gene3D - 726 867 - -
Lan3g0868 1034 Gene3D CHASE domain 142 357 IPR042240 -
Lan3g0868 1034 PANTHER TWO-COMPONENT HISTIDINE KINASE 52 1029 - -
Lan3g0868 1034 CDD HisKA 411 472 IPR003661 GO:0000155|GO:0007165
Lan3g0868 1034 ProSiteProfiles CHASE domain profile. 138 350 IPR006189 -
Lan3g0868 1034 Coils Coil 461 481 - -
Lan3g0868 1034 Gene3D - 475 710 IPR036890 -
Lan3g0868 1034 ProSiteProfiles Response regulatory domain profile. 890 1026 IPR001789 GO:0000160
Lan3g0868 1034 SUPERFAMILY CheY-like 887 1025 IPR011006 -
Lan3g0868 1034 Pfam His Kinase A (phospho-acceptor) domain 411 476 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0868 Lan-Chr3 16755844 16762132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0868 52 1031 Histidine Kinase Gene Family AT2G01830 70.262 0.0 1383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan3g0868 HATPase_c 1.1e-30 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0868 K14489 - gmx:100818481 1672.14