LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan3g0865	ATGGAGAATCCTCAAATGGGTTTTGGAGTTTCTTCCATAATCTGTTTTGTTTTGGTTCTTTCTGTGATGGTAATCGCAGCTAGAGGCCAAGATTATGAGGTGATGATAATGTTGAAGAAGATGATCATTAATGCCCCTACTACTTTACAATGGACAGATTCTGATGTATGCAAATGGAATCATGTTCAATGTGATAAAGGGAAACGTGTCACTTCTATTCAAATTGGTAATCAAAATCTTCAAGGTTCTTTACCTAAGGAACTTGAGAAACTTTCAGAGTTAGAAAATTTTGAGTGCCAAGGAAACAATTTGACTGGTTCATTCCCTTACCTTACCAAATCCTTACAGAATTTGTTTATTCAAGACAACATGTTCAGCTCATTCCCCAATGATTTCTTCATGGATATGAGCAATTTGGAAGCGGTTTGTTTAGATGACAACCCTTTCCCTCAATGGCAGGTTCCTCATAGTCTGGAGGATTGTGTTGCACTCCAGAATTTCAGTGCTCAAAATGTTGGTTTTGTTGGGACAATCCCAGATTTTTTCGGCAGTCGTGGTCCTTTCCCAGGTCTGCTTAACTTGGCCTTATCTCGTAATTATTTCGAAGGTGGTTTGCCTGCAAGCTTTTCAGGCAGTTCAATAGAGACCCTTTTGCTGAATGGACAGAATAGTAATTCTAAACTCAATGGTACACTTGAGGTGTTAAAGAATATGACATCCTTGAAGCAAATTTGGGTTCATGGTAATTCATTCACCGGTCCTATACCTGATTTGTCACATCATGATCAACTTTATGATGTGAGTTTGAGGGATAACCAGTTAACTGGTGTTATTCCACCCTCTCTCGTGACTCTTCCGAGTCTTAAGGTTGTGAATTTGACCAATAATAATTTACAAGGGTCCCCTCCAGTGTTCGAAAATGGGGCAAAAGTTGATAATAATATGAACACTGGGAGAAATCAGTTTTGCACAAAGATTCCAGGGCAGCCATGTAGTCCCTTAGTGAATACTTTACTATCTGTTGTTGAACCTTTGGGCTATCCTCTCAGGTTTGCTGAAAGTTGGGAGGGTAATGATCCATGTGCTAATACATGGACTGGGATAGTTTGTTCCGGTGGAAACATTTCTGTTATAAACTTTCAGAGCATGGACTTGTCTGGCTCTATTTCGCCTAGTTTTGCTACGCTTACATCTGTGACAAAGTTGCTTATTGCTAACAATCATATCACTGGTACCATACCAACTGTACTTACTAGTATGCCTCTTTTGCAAGAGTTAGATGTTTCGAATAATAACTTATATGGTCGCGTACCATCATTCCGTGAAGGTGTGGTTCTTAAATTAGGTGGGAATCCTGATATTGGAAAAGATAAACCTACTTCAGGAGCTGACTCGGATTCTTCTATAGGTGATAATATAAAAAATCATCTTCAGATCGTTATTGGAATTGTGGTAGGGGCTGTTATTTTACTTGGTATAGGGATACTATTATTTATTAAGTACAGAAGAAAAATGAAGCCTAAAGGAAAAGTTCAAAATCCAAATGCAATAGTACATCCTCGCCATTCTGTGGATGACAATGCTATGAGGATAAGTATTGCTGGTGTTGGTGGTGGAGGAGCTCCATTAAGTCCAAGGAGCAATGTTTATCCGGTGGAAGCTGGTAGCATGGTGATCTCAATTCAAGTTTTGAGAGAAGTTACCAACAATTTTAGCGAAGAAAACATATTAGGGAAGGGTGGTTTTGGCACTGTGTACAAGGGAGAGTTGGAAGGTGGGACAAAGATTGCAGTGAAAAGGATGCAATCAGGAAATATGGCAGAGAAGGGACTGAGTGAGTTTATGGTTGAAATTGCGGTACTCACTAAGGTGAGACACAAACATTTGGTTTCACTCTTAGGGTATTGCTTGGATGGAGATGAGAGACTTCTTGTTTATGAATACATGCCACAAGGTGCTCTTAGTAGATTATTGTTCCATTGGAAAGAGGAAGGTCTAAAACCACTTGAATGGAAGACAAGGCTTACTATTGCGTTGGATGTCGCTAGAGGTGTCGAATATCTTCATGATTTGACTCAACAAATTTTTATCCATAGGGATCTCAAACCATCCAACATTTTGCTTGGAGATGATCTGAGAGCTAAAGTATCTGACTTTGGATTGGTTCGGCTTGCTCCACAAGGAAAAGCCTCATTTCAAACTGGGCTAGCTGGGACTTTCGGATATCTGGCACCAGAGTATGCAGCTACCGGACGACTTACAACAAAAGTTGATGTATATAGTTTTGGAGTGATCCTTATGGAGATGATAACCGGAAGAAAGGCACTTGATGAAAGCCGACCAGAAGAGAACTTCCACCTTGTTACATGGTTCCGCAGGATGCTGCTGAAAAAAGATTTATTCCCAATGATCATCGATCCGACAATTGCTGTTGACGACGAAACCTTTGCCAGCATTAGCACTGTTGCAGAGTTGGCAGGCCACTGCACTTCAAGAGAGCCTTACCAGCGTCCTGATATGAGTCATGCGGTGCGAGTGCTATCACCTCTTGTCGAGGTTTGGGAGCCTACAGAACCAATTGATGAAACATATGGGGTCAACTTTGAGATGACACTACCACAAGCACTCCAAAGGTGGGAGGATCATGAAGGAAACAGTACCTGGAATAGTACGTATTCTTCTTCATCAGCCAACACTAATACTAATGGACAGAGCCAAGCATTTCCCTTAGGCCATCTTTAA	2742	0.4081	MENPQMGFGVSSIICFVLVLSVMVIAARGQDYEVMIMLKKMIINAPTTLQWTDSDVCKWNHVQCDKGKRVTSIQIGNQNLQGSLPKELEKLSELENFECQGNNLTGSFPYLTKSLQNLFIQDNMFSSFPNDFFMDMSNLEAVCLDDNPFPQWQVPHSLEDCVALQNFSAQNVGFVGTIPDFFGSRGPFPGLLNLALSRNYFEGGLPASFSGSSIETLLLNGQNSNSKLNGTLEVLKNMTSLKQIWVHGNSFTGPIPDLSHHDQLYDVSLRDNQLTGVIPPSLVTLPSLKVVNLTNNNLQGSPPVFENGAKVDNNMNTGRNQFCTKIPGQPCSPLVNTLLSVVEPLGYPLRFAESWEGNDPCANTWTGIVCSGGNISVINFQSMDLSGSISPSFATLTSVTKLLIANNHITGTIPTVLTSMPLLQELDVSNNNLYGRVPSFREGVVLKLGGNPDIGKDKPTSGADSDSSIGDNIKNHLQIVIGIVVGAVILLGIGILLFIKYRRKMKPKGKVQNPNAIVHPRHSVDDNAMRISIAGVGGGGAPLSPRSNVYPVEAGSMVISIQVLREVTNNFSEENILGKGGFGTVYKGELEGGTKIAVKRMQSGNMAEKGLSEFMVEIAVLTKVRHKHLVSLLGYCLDGDERLLVYEYMPQGALSRLLFHWKEEGLKPLEWKTRLTIALDVARGVEYLHDLTQQIFIHRDLKPSNILLGDDLRAKVSDFGLVRLAPQGKASFQTGLAGTFGYLAPEYAATGRLTTKVDVYSFGVILMEMITGRKALDESRPEENFHLVTWFRRMLLKKDLFPMIIDPTIAVDDETFASISTVAELAGHCTSREPYQRPDMSHAVRVLSPLVEVWEPTEPIDETYGVNFEMTLPQALQRWEDHEGNSTWNSTYSSSSANTNTNGQSQAFPLGHL*	914

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan3g0865	913	Pfam	Protein kinase domain	572	844	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan3g0865	913	Gene3D	Ribonuclease Inhibitor	29	329	IPR032675	-
	Lan3g0865	913	Gene3D	Phosphorylase Kinase; domain 1	544	648	-	-
	Lan3g0865	913	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	696	708	IPR008271	GO:0004672\|GO:0006468
	Lan3g0865	913	PANTHER	OSJNBA0070M12.3 PROTEIN	6	906	-	-
	Lan3g0865	913	Gene3D	Ribonuclease Inhibitor	334	458	IPR032675	-
	Lan3g0865	913	SMART	serkin_6	571	851	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan3g0865	913	Gene3D	Transferase(Phosphotransferase) domain 1	649	858	-	-
	Lan3g0865	913	MobiDBLite	consensus disorder prediction	887	913	-	-
	Lan3g0865	913	ProSiteProfiles	Protein kinase domain profile.	571	851	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan3g0865	913	CDD	STKc_IRAK	577	850	-	-
	Lan3g0865	913	SUPERFAMILY	Protein kinase-like (PK-like)	559	880	IPR011009	-
	Lan3g0865	913	ProSitePatterns	Protein kinases ATP-binding region signature.	577	599	IPR017441	GO:0005524
	Lan3g0865	913	PANTHER	TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED	6	906	-	-
	Lan3g0865	913	SUPERFAMILY	L domain-like	42	307	-	-
	Lan3g0865	913	SUPERFAMILY	L domain-like	337	440	-	-
	Lan3g0865	913	Pfam	Leucine rich repeat N-terminal domain	337	371	IPR013210	-
	Lan3g0865	913	Pfam	Leucine rich repeat N-terminal domain	30	65	IPR013210	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan3g0865	Lan-Chr3	16692792	16696514	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan3g0865	70	862	Receptor kinase-like Gene Family	AT1G55610	28.862	2.07e-82	287

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-IX	Lan3g0865		Pkinase	3.6e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan3g0865	-		K00924	gmx:100788903	1204.5