Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0859 ATGGATAGAATCTTAGGTCTTCTCAAACTTCGTGTTAAAAGAGGCATTAATCTTGCCATTCGGGACGCTCGTACTAGTGATCCTTATGTCGTTGTTCATTTCGGTGATCAGAAGCTGAAGACTCGTGTCATAAAAAACAACTGCAATCCTGAGTGGAATGAAGAATTGACCCTTTCTGTTAGGGATGTTAAAACTCTTATACATCTGACAGTTTATGACAAAGACACTTTCTCAGTGGATGACAAAATGGGTGATGCAGAAATAGACATAAAGCCATATATGCAGAGTATGAATATGGGATTGAACAAGCTCCCAAATGGCTGTGCAGTGAAGAGGGTTCTACCAAGTAGGAGTAACTGCCTTGCTGAAGAGAGCAGCTGCGTTTGGCATAACGGAAATATCACCCAAGAAATGATTCTAAGATTGAGAAATGTTGAGTGTGGAGAAGTAGTTGTTGAACTTGAGTGGGTTGATGTTCCAAGTTGA 486 0.4053 MDRILGLLKLRVKRGINLAIRDARTSDPYVVVHFGDQKLKTRVIKNNCNPEWNEELTLSVRDVKTLIHLTVYDKDTFSVDDKMGDAEIDIKPYMQSMNMGLNKLPNGCAVKRVLPSRSNCLAEESSCVWHNGNITQEMILRLRNVECGEVVVELEWVDVPS* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0859 161 CDD C2_ArfGAP 5 148 - -
Lan3g0859 161 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Lan3g0859 161 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 160 - -
Lan3g0859 161 Pfam C2 domain 7 97 IPR000008 -
Lan3g0859 161 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 160 IPR044562 -
Lan3g0859 161 Gene3D C2 domain 4 161 IPR035892 -
Lan3g0859 161 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 101 IPR035892 -
Lan3g0859 161 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0859 Lan-Chr3 16523971 16526537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0859 38 161 C2H2 Transcription Factor Family AT1G70790 67.460 4.68e-59 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0859 - - gmx:100788395 273.478