Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0854 ATGCACCCATACAACCGTCTTCCGTCCACTGGCTACTCCACGCCGTCACCTCCGTCGTCGCCTCTCCGCTCTCCCCGCCTCCGCCCTGGCCGGATCAAGACCGGCCGGTTCTCCCCGAACCAACCGCCGCCGGTTCGAACCGTATCGCAACGCCTCGCGTGGCTATTTCTCTCGGTTCTTCTTCGACGCCAGGGCGTGTTCCTCTTCGCTCCTCTCATTTACATTTCTTGTATGCTCCTTTATATTGGCTCTGTTTCCTTCGATATTGTTCCGATTATCAAACACCGTCCTGCTCCTGGCTCCGTTTACCGGAGCCCCGAGCTGTATTCTAAGCTCCGAGATGAGATGGATTCCGATGATTCTTCTGTTGATGCGATATCAACAATATGGAAGAGTGCATATAAAGGTGGTGCGTGGAAGCCATGTGTAAGCATGTCTTCAGGAGGCCTTCCTGAATCAAATGGGTACATATATGTAGAGGCTAATGGTGGCTTAAATCAGCAAAGGACATCGATATGCAATGCTGTTGCTGTAGCTGGCTATCTCAATGCTACACTTGTGATCCCCAATTTCCATTATCATAGCATATGGAAAGATCCTAGCAAATTCAGTGACATTTATGATGAAGAATATTTTGTCAATACCTTGAAAAATGATGTACGGGTGGTTGAAGAGATTCCTGAGTACCTGATGGAAAGGTTTGGCAGCAACATGACAAATGTTTACAATTTCAGGATCAAGGCATGGTCTTCCATTCAGTATTACAAAGACGTGGTACTCCCAAAGTTACTTGAAGAAAAGGTCATTAGGATTTCACCTTTTGCAAATAGATTGTCATTTGATGCTCCTCCGGTTGTTCAGCGTCTCAGATGCTTAGCAAATTATGAGGCTTTACGATTTTCAAGTCCTATATCGACCATGGGTGAGTCTTTGGTGGCAAGAATGAGGAAACATAGTGAAATGAATGGTGGAAAATATGTATCCATACATCTTCGTTTTGAAGAGGATATGGTTGCTTTCTCTTGTTGTGTTTTTGATGGTGGAAAACAGGAGAGACAAGACATGACCACAGCAAGAGAAATAGGTTGGAAAGGGAAATTTACAAAACCTGGACGAGTCATACGTCCTGGAGCAATTAGGATAAATGGGAAGTGCCCCCTCACTCCACTAGAGGTTGGCCTTATGCTGAGGGGAATGGGTTTCACAAAGAACACACCTATCTATCTGGCATCTGGAAAAATATATAATGCTGAGAAAACCATGGCCCCACTACTGGAGATGTTTCCTAATTTGCATACTAAGGAGACTCTAGCATCTGAAGAGGAACTTTCTCTTTTTAAGAATTATTCTTCCAGGATGGCTGCCATAGACTACACTGTTTGTCTTCATAGTGAGGTTTTTGTCACAACTCAGGGTGGTAACTTCCCTCATTTTCTACTAGGCCACAGAAGATACATCTATGCTGGACACTCCAAGACAATTAAGCCTGATAAGCGGAAGTTGGCATTACTCTTTGATAGTCCCAATATTGGATGGAAAAGTCTCAAGCGTCATTTGCTGAGCATGAGGTCACACAGTGATTCCAAGGGGGTTGAGCTCAAAAGACCAAATGACTCAATATACAGCTTTCCATGCCCAGATTGTATGTGCCGTGCAAATAGAACTGACGATTCAAGACCCTCACCAGCAACTTAA 1695 0.4466 MHPYNRLPSTGYSTPSPPSSPLRSPRLRPGRIKTGRFSPNQPPPVRTVSQRLAWLFLSVLLRRQGVFLFAPLIYISCMLLYIGSVSFDIVPIIKHRPAPGSVYRSPELYSKLRDEMDSDDSSVDAISTIWKSAYKGGAWKPCVSMSSGGLPESNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLVIPNFHYHSIWKDPSKFSDIYDEEYFVNTLKNDVRVVEEIPEYLMERFGSNMTNVYNFRIKAWSSIQYYKDVVLPKLLEEKVIRISPFANRLSFDAPPVVQRLRCLANYEALRFSSPISTMGESLVARMRKHSEMNGGKYVSIHLRFEEDMVAFSCCVFDGGKQERQDMTTAREIGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFTKNTPIYLASGKIYNAEKTMAPLLEMFPNLHTKETLASEEELSLFKNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLLGHRRYIYAGHSKTIKPDKRKLALLFDSPNIGWKSLKRHLLSMRSHSDSKGVELKRPNDSIYSFPCPDCMCRANRTDDSRPSPAT* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0854 564 PANTHER - 1 561 IPR024709 -
Lan3g0854 564 PANTHER PROTEIN ESMERALDA 1 1 561 - -
Lan3g0854 564 MobiDBLite consensus disorder prediction 1 44 - -
Lan3g0854 564 PIRSF UCP009360 34 554 IPR024709 -
Lan3g0854 564 CDD O-FucT_plant 156 493 IPR024709 -
Lan3g0854 564 Pfam GDP-fucose protein O-fucosyltransferase 156 485 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0854 Lan-Chr3 16444597 16450733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0854 141 553 Miscellaneous Gene Families AT1G22460 39.862 3.61e-97 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0854 - - gmx:100786673 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0777 15 16877314 16881093 Lan3g0854 3 16444597 16450733 LSH