Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0835 ATGTGTGAGGAACACCAGGTTAAGGAGCTTGAGATGGAAAACTCATATAAAAATGGTTTCAAACTAAGTGTAAAACTAAGGGAACCAAACCTAGTTCCTCCATCAGAAGAAACAAAGAAAGGGATATATTTCCTTTCTAACCTTGACCAGAACATTGCAGTGAATGTAAGAACTGTTTACTGCTTCAAATCAAAAGAGAATGGGAATGAGAATGCTGAAGAAGTGATGAAGAATTCTTTGAGGAAGGTTCTTGTTCATTATTATCCACTTGCTGGGAGATTGAACATAAGCTCAAAGGGTAAACTTGTAGTTGATTGCACTGGTGAAGGTGCTATGTTTGTAGAAGCTGAAGCAAATTGTTCAATGGAGGAGATTGGTGATATCACAAAGACAGATCCAAGGACTCTTGGTAAGCTGGTTTATGATATTCCTGAAGCAAAGCATATACTTCAAATGCCTCCTTTGGTTGCTCAGGTAACCAAGTTTAAATGTGGAGGCTTTGCTCTTGGGCTATGCATGAATCACTGCATGTTTGATGGCATTGGTGCTATGGAGTTTGTGAATTCTTGGGGTGAAGAAGCTAGAGGCTTACCACTCTCTAACCCTCCATTTCTTGAAAGAGCCATACTCGAGGCGCGTAATCCACCAAAGATAGAGTTTCTGCACCAAGAATTTGCAGACATAGAAGACAAATCCAACACAAATAGTTTGTATGAAGAAGATGAAATGGTCTACAAGTCTTTCTTTTTTTATCCTGAGAAGCTAAACCAGCTTAAGGAAAAAGCTATGGAAAATGGGGTTCTTGAATCTTGCACTACTTTTGAAGTCCTCTCAGCTTTTGTATGGATAGCTAGAACAAAAGCACTTAAAATGTTGCCTGATCAAGAAACAAAACTGCTTTTTGCTGTTGATGGAAGAGCCAAGTTTAACCCTACACTTCCAAAAGGGTACTTTGGGAATGGGATTGTGTTGACAAATTCTTTGTGTAAGGCAGGTGAATTGACTAAAATGCCCTTCTCATTTGCTGTGAAGCTTGTTCAAGAAGCTATCAAAATGGTCACTAACAATTACATGAGATCAGCTATAGATTATTTTGAGGTCACAAAAGCTAGGCCTTCTTTATCTTGTACCCTTTTGATCACAACTTGGTCTAGATTGTCTTTTCATACCACTGATTTTGGTTGGGGAGAACCTGTAATTTCAGGACCAGTGTCATTGCCTGAGAAAGAAGTAATCTTGTTCCTTTCTCATGGCAAAGAAAGAAGAAACATCAATGTTCTTTTGGGTTTGCCAGATCCTGTCATGAAGATCTTCCAAGACTTGATGCAAATATAG 1335 0.388 MCEEHQVKELEMENSYKNGFKLSVKLREPNLVPPSEETKKGIYFLSNLDQNIAVNVRTVYCFKSKENGNENAEEVMKNSLRKVLVHYYPLAGRLNISSKGKLVVDCTGEGAMFVEAEANCSMEEIGDITKTDPRTLGKLVYDIPEAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGEEARGLPLSNPPFLERAILEARNPPKIEFLHQEFADIEDKSNTNSLYEEDEMVYKSFFFYPEKLNQLKEKAMENGVLESCTTFEVLSAFVWIARTKALKMLPDQETKLLFAVDGRAKFNPTLPKGYFGNGIVLTNSLCKAGELTKMPFSFAVKLVQEAIKMVTNNYMRSAIDYFEVTKARPSLSCTLLITTWSRLSFHTTDFGWGEPVISGPVSLPEKEVILFLSHGKERRNINVLLGLPDPVMKIFQDLMQI* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0835 444 Gene3D - 19 225 IPR023213 -
Lan3g0835 444 Gene3D - 226 443 IPR023213 -
Lan3g0835 444 Pfam Transferase family 23 441 - -
Lan3g0835 444 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 24 443 - -
Lan3g0835 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0835 Lan-Chr3 15860397 15864982 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0835 22 442 Monolignol Biosynthesis Gene Families AT5G48930 33.941 9.13e-84 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0835 K15400 - gmx:100792433 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g1108 10 16294804 16300317 Lan3g0835 3 15860397 15864982 LSH
Lan15g0364 15 6640773 6642534 Lan3g0835 3 15860397 15864982 LSH