Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0831 ATGATGATGAATCAAGTACAGGGAGAGAAGAAGCAGCTTCAGAAAACCGAGGCCTGTGATTTAAGGGCAGGTGTTGGGGCTGAGCATAGTCTTGTCAATGTTTCAGGGGACAATAATATCACAAGTAATAATCGTGGATCAGATCAGATCCACGATTATTACTATCAGAATCACTGCCACCTCAACCACCACCAACTCGGTTTTGTTCACTTTGGAAATGTGAACAAGAAAAAAAGAATGGCTAGACAAAGAAGATCCTCAACCAACGCCACATTTATGCATCAGCTTAACCCTTTTTCTTCAAAGCAAACACCACCGGTCACTCCACCACCACCACCATTTCTTCTTCCTCCTACAACCTCGCACGTGTCAATACCTCCATCTCCCGCTCGTGAAACCGGTCATGGAACGTTGAAATTCCTTTTCCAAAAGGAGCTAAAGAACAGTGATGTTAGTTCCCTTAGGAGAATGGTATTGCCAAAGAAAGCAGCAGAGGCTTTCCTTCCAGCCCTTGAATCTAAGGAAGGAATTCTTATCAGCATGGATGATCTAGATGGTATTCATGTATGGAATTTCAAGTACAGGTACTGGCCTAATAACAATAGTCGGATGTATGTACTTGAAAATACTGGAGACTTTGTTAACACACATGGCTTGCACTTTGGAGATTCAATTATGATTTACCAAGATAGTCAAAACAATAACTATGTTATTCAGGCCAAAAAGGCTTATGAATTTATGGAAGAAACAAGTGATACAACAAATGATATCTTCCTTAATGATTATGAGGTTATCAAACCTGGTAGCTTCAACATAACTTATCCTTTAGTGAATGATACAAACATGTCATTCATATATGATACTACCTTCTCAAATGACTCTCCATTTGATTTTTTGGGTGGATCAATGACCAATTTATCAAGAACCGGAACAGATGAAACCTTTGGGTCTGTTGAGAATTTGTCACTTGATGACTTCTATTAA 984 0.3933 MMMNQVQGEKKQLQKTEACDLRAGVGAEHSLVNVSGDNNITSNNRGSDQIHDYYYQNHCHLNHHQLGFVHFGNVNKKKRMARQRRSSTNATFMHQLNPFSSKQTPPVTPPPPPFLLPPTTSHVSIPPSPARETGHGTLKFLFQKELKNSDVSSLRRMVLPKKAAEAFLPALESKEGILISMDDLDGIHVWNFKYRYWPNNNSRMYVLENTGDFVNTHGLHFGDSIMIYQDSQNNNYVIQAKKAYEFMEETSDTTNDIFLNDYEVIKPGSFNITYPLVNDTNMSFIYDTTFSNDSPFDFLGGSMTNLSRTGTDETFGSVENLSLDDFY* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0831 327 SMART B3_2 142 244 IPR003340 GO:0003677
Lan3g0831 327 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 24 327 IPR044800 GO:0003700
Lan3g0831 327 Gene3D - 138 255 IPR015300 -
Lan3g0831 327 Pfam B3 DNA binding domain 142 238 IPR003340 GO:0003677
Lan3g0831 327 ProSiteProfiles B3 DNA-binding domain profile. 142 244 IPR003340 GO:0003677
Lan3g0831 327 CDD B3_DNA 140 242 IPR003340 GO:0003677
Lan3g0831 327 MobiDBLite consensus disorder prediction 85 102 - -
Lan3g0831 327 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 24 327 - -
Lan3g0831 327 SUPERFAMILY DNA-binding pseudobarrel domain 140 238 IPR015300 -
Lan3g0831 327 MobiDBLite consensus disorder prediction 81 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0831 Lan-Chr3 15801790 15806813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0831 62 327 B3 DNA Binding Superfamily AT3G26790 50.980 2.33e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lan3g0831 B3 9.9e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0831 - - gmx:100783961 411.764