Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0808 ATGTATGCTGAAACAGGTCTTTTCTTCCCATACTTGCAGAACTTCTCTCAAGAGCTACATCAACTTGAGGAGTACTGCAAAACCCAGAAATCTAATGTTTCAATGAATGACCTTGTTCAGTCGTCTGCTATGGCCGAGTATGATTTTGCAGCAGAGGGAGATCTGTTCAAAGCACCCGAACCAATTATTGAAGAGCCATTCATGGACCTGGATCCTATGACAGCAGCAATCTCAATGATGTCTTGTGGAGAAGGCGTCTCGTCACAGGGACTTCAACCCACAGATATTGATGTTCTTCAAAAAGAACAGCTTCTTAGCGACATGTTATATGAGTGCGAAAAGGATCTCTTAGAAAAGGCTGCAATAGAATCACCATTCTCTGAGATTTTGGAAATTAAGGCTCCTGCTTTAAACACGGATGAGTACTCAATTCAAGAAGATAAACCATTTCCGGACATGCCAAAGAGTGTTAGTTCAGTAAGTTTGAGCTCAATGGACTGGATGTATGGAGCTGCAATTAAGCCGGCTTTCCTTGATTTCCCAGGAATAGATTTCAATTCAGATTATGGAATGCGAAGATCATTTAGTGAAGGAGATATAAAGACTCTCGGTAATGGTAATTTGAACATCGTCCAGTCCCCCCGCGAAAGGCCCTTTCTTATAAGCAACTGCACCAGTGAGGAACGCCAAGAAAAGCTTTCCAGATACAGGAATAAGAAAACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGACCGAAGAATCCGATGTGAAAAGGCAATAA 840 0.4202 MYAETGLFFPYLQNFSQELHQLEEYCKTQKSNVSMNDLVQSSAMAEYDFAAEGDLFKAPEPIIEEPFMDLDPMTAAISMMSCGEGVSSQGLQPTDIDVLQKEQLLSDMLYECEKDLLEKAAIESPFSEILEIKAPALNTDEYSIQEDKPFPDMPKSVSSVSLSSMDWMYGAAIKPAFLDFPGIDFNSDYGMRRSFSEGDIKTLGNGNLNIVQSPRERPFLISNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESDVKRQ* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0808 279 ProSiteProfiles CCT domain profile. 229 271 IPR010402 GO:0005515
Lan3g0808 279 Coils Coil 12 32 - -
Lan3g0808 279 PANTHER CCT MOTIF FAMILY PROTEIN 26 277 - -
Lan3g0808 279 Pfam CCT motif 229 271 IPR010402 GO:0005515
Lan3g0808 279 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 26 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0808 Lan-Chr3 15107285 15111630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0808 212 274 C2C2-CO-like Transcription Factor Family AT3G21880 44.444 7.17e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan3g0808 CCT 1.7e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0808 - - lang:109334668 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0687 15 15533258 15538523 Lan3g0808 3 15107285 15111630 LSH
Lan14g0536 14 11077441 11082064 Lan3g0808 3 15107285 15111630 LSH