Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0805 ATGGGGAAGAAAGGAGGTAGTTGGTTCTCATCTGTGAAGAAAGTATTCAAGTCATCTTCAAAGGACTCGCCTCTACCTGATAAGAAGGACAAAGAAGAGAAATGGCCACATGAAGCAACAGAAGTTTTGTCTTTTGAGCATTTTCCTGTAGAGAGTTCACCTTATGTTACCAATGACGGGAGTACCACATCCACTCCGGTGACTGAAGATAACCATCATGCGGTTGCCTTTGCAGAGGCAACAGCTGCAGCGGCGGAAGCTGCGGTGGCGGCTGCTCAAGCTGCCGCTAGGGTTGTGAGAATGGCAGGTTATGAACGACACACTAAAGAAGAAAGAGCAGCATCAGTCATTCAATCTTACTACAGAGGGTACCTTGCTCGACGAGCACTTCGTGCTTTGAAGGGATTAGTGAGGCTGCAAGCACTTGTAAGGGGACACAATGTGAGGAAGCAAGCACAGATGACAATGAAATGCATGCAAGCATTGGTGAGAGTACAAACAAGGGTAAAAGCTAGAAGGCTTCAATTAACAAAGGAGAAGCTTCAAAGAACACTATTGGAAGAACATGAACAAAGAATTCTCAATGAACAAGTGCCTCTTTATAAGCCTATGAGTCCTATGACAAAGTTGCACATTGATGGGTGGGACAATAGGAACCAAAGTAGCCAAAAGATTCAGAGAAATGATTTGATGAAACATGAGGCTGCAATGAAAAGAGAGAGAGCTCTTGCATACGCTTTCAATTGTCAGCAACAGCAGCAATATTTGCAGATAAACCCAAATGGTAATGATATTGGAAGCTATGCAAAAGAGCATGAAGCAGCAGCTCAATTGGGTTGGGACTGGTTAGCACCACAACAACACCATCTTAGGCACTTGTGGGGCCCACTTGAGACAACATTCACCACTTCAGCAACAACAACCACAGAAGACATGTCTGAAGAAAAAACAGTTGAAATGGACATGGGCCTAATGGGTCAAGGCTTTCTTGATTCAAGCCCAACATCTGAAAGGTACAGCCAGGGACAGAATAGTGTTGGGGTACCTAGCTATATGGCCCCAACCCAGTCTGCAAAAGCCAAGGTTCGTATTCAAAGCCCGTTTAGACAACGGGCTTTATCTGGGCCTAAATGGAAATCACCATCAAGGAGAAATTCTCTTAATGGGTTGGGTTGTGATTCATCTAGCTCTTGTGGGGCTACTGCAGCTCACCATTTTCCTAAAAGCCCAAGCCCACACATAAATGGGGTTCAACTCCAATCAAGATGGATTTCGAGTGGGAGCCCGGATAATATTGGCGTCGAGGATTGGGCCCTACCCCTTGGTGCCCATGGTTGGCAATGA 1344 0.4554 MGKKGGSWFSSVKKVFKSSSKDSPLPDKKDKEEKWPHEATEVLSFEHFPVESSPYVTNDGSTTSTPVTEDNHHAVAFAEATAAAAEAAVAAAQAAARVVRMAGYERHTKEERAASVIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMKCMQALVRVQTRVKARRLQLTKEKLQRTLLEEHEQRILNEQVPLYKPMSPMTKLHIDGWDNRNQSSQKIQRNDLMKHEAAMKRERALAYAFNCQQQQQYLQINPNGNDIGSYAKEHEAAAQLGWDWLAPQQHHLRHLWGPLETTFTTSATTTTEDMSEEKTVEMDMGLMGQGFLDSSPTSERYSQGQNSVGVPSYMAPTQSAKAKVRIQSPFRQRALSGPKWKSPSRRNSLNGLGCDSSSSCGATAAHHFPKSPSPHINGVQLQSRWISSGSPDNIGVEDWALPLGAHGWQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0805 447 MobiDBLite consensus disorder prediction 20 36 - -
Lan3g0805 447 Pfam Protein of unknown function (DUF4005) 333 399 IPR025064 -
Lan3g0805 447 Gene3D - 107 162 - -
Lan3g0805 447 MobiDBLite consensus disorder prediction 15 36 - -
Lan3g0805 447 PANTHER IQ-DOMAIN 21 1 413 - -
Lan3g0805 447 Coils Coil 171 191 - -
Lan3g0805 447 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Lan3g0805 447 MobiDBLite consensus disorder prediction 379 402 - -
Lan3g0805 447 Coils Coil 75 95 - -
Lan3g0805 447 SMART iq_5 109 131 IPR000048 GO:0005515
Lan3g0805 447 SMART iq_5 132 153 IPR000048 GO:0005515
Lan3g0805 447 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Lan3g0805 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 155 IPR027417 -
Lan3g0805 447 MobiDBLite consensus disorder prediction 370 414 - -
Lan3g0805 447 Pfam IQ calmodulin-binding motif 111 131 IPR000048 GO:0005515
Lan3g0805 447 Pfam IQ calmodulin-binding motif 137 152 IPR000048 GO:0005515
Lan3g0805 447 PANTHER IQ-DOMAIN 5-RELATED 1 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0805 Lan-Chr3 14990108 14995789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0805 1 437 IQD Protein Family AT3G49260 45.935 9.33e-82 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0805 - - aprc:113873497 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0678 15 15438254 15443272 Lan3g0805 3 14990108 14995789 LSH
Lan14g0529 14 10966805 10970260 Lan3g0805 3 14990108 14995789 LSH