Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0801 ATGGCTTTGTCAAGCCCACAAACACAAAGATTCATCTTAACCAATAATCTTCATTCTCCATCCACTTCCAAGAACACTCACAGAACTAGTAGTAGTAATAACTGTTTTACTACAATTACAAGCAGAAGAAGTAGGTGTTGTTCTGCCATAGCCATTGATGCTCCATCATCTTTGACTGAGGTACCTGGTATAAGATGGGGTTCCATAGCTTTGCAGGGTATGAGAGAAGAGATGGAAGATGATATCATTGTTCGACCTGATAGCCTTCATGGTTTCTCTTTTGCTGCTGTTTTTGATGGCCATGGAGGGGTTTCTTCTGTTCAGTTTCTTAGGGATGAGCTGTACAAGGAGTGTCTTGAAGCTTTACAAGGTGGGTTACTGTTAGTCGAAAAAGATTTTAAAGCCATTAAAGAAGCATTAGAGGAGGCATTTGTCAAAGCTGACACAAGGTTGTTAAAATGGCTTGAAATGAATAGAGAGGAGGACGAATCGGGCGCTACAGCAACTGCAGTGTTCATAGGAGACGATAAGCTTCTCGTTTCACATATTGGTGACTCATCTGTGGTTCTGTGCAGATCTGGAAAAGCAGAAATGCTGACTAGTCCTCACCGGCCGTATGGGAACAACAAGGCTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGATATCAAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACATGCGATTCAAAACAAAGAAGAATGAGATGCTGCAAAAAGGAGCTCAGGAAGGAAGATGGACGGAAAAATTTATTTCTCGTGTACGGTTCAACAATGACTTGGTTGTTGCATGCCCTGATATTTATCAAGTTACACTTGGCTCAGATACAGAGTTTCTAGTATTAGCATCTGATGGTTTATGGGATTACATAAGCAGCTCAGATGCCGTTTCTTTTGTGAGGGATCAACTACGAAAACATGGAAACATTCAGCAAGCTTGTGAAGCGCTTGCACAAGCAGCTTTGGACCGGCGTACACAGGATAATGTCAGCATTATAATTGCAGACTTAGGGCGAACAGACTGGCAGAATGTACCACTGCAGCAGCAAAATGTTACCTTTGAGCTTGTCCAAGCCCTTGCTACCATTGGCATTGTGTCAATTGGGATTTGGTTTTCATCTCAGCTTTCTTTATAA 1185 0.4203 MALSSPQTQRFILTNNLHSPSTSKNTHRTSSSNNCFTTITSRRSRCCSAIAIDAPSSLTEVPGIRWGSIALQGMREEMEDDIIVRPDSLHGFSFAAVFDGHGGVSSVQFLRDELYKECLEALQGGLLLVEKDFKAIKEALEEAFVKADTRLLKWLEMNREEDESGATATAVFIGDDKLLVSHIGDSSVVLCRSGKAEMLTSPHRPYGNNKASLQEIKRIREAGGWISNGRICGDIAVSRAFGDMRFKTKKNEMLQKGAQEGRWTEKFISRVRFNNDLVVACPDIYQVTLGSDTEFLVLASDGLWDYISSSDAVSFVRDQLRKHGNIQQACEALAQAALDRRTQDNVSIIIADLGRTDWQNVPLQQQNVTFELVQALATIGIVSIGIWFSSQLSL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0801 394 Pfam Protein phosphatase 2C 67 346 IPR001932 -
Lan3g0801 394 PANTHER PROTEIN PHOSPHATASE 2C 57 10 390 - -
Lan3g0801 394 Gene3D - 64 360 IPR036457 -
Lan3g0801 394 PANTHER PROTEIN PHOSPHATASE 2C 10 390 IPR015655 GO:0004722|GO:0006470
Lan3g0801 394 ProSiteProfiles PPM-type phosphatase domain profile. 65 353 IPR001932 -
Lan3g0801 394 MobiDBLite consensus disorder prediction 14 33 - -
Lan3g0801 394 ProSitePatterns PPM-type phosphatase domain signature. 94 102 IPR000222 GO:0043169
Lan3g0801 394 SUPERFAMILY PP2C-like 57 354 IPR036457 -
Lan3g0801 394 SMART PP2C_4 55 351 IPR001932 -
Lan3g0801 394 CDD PP2Cc 64 353 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0801 Lan-Chr3 14928504 14933897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0801 1 330 PP2C-type Phosphatase Gene Family AT4G27800 60.423 1.17e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0801 K04457 - gmx:100784071 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0801 3 14928504 14933897 Lan10g0601 10 5271059 5273048 PCT