Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0778 ATGGGTTCAACCGGTGAGACACAAATAACTCCAACCCATGTATCAGACGAAGAGGCTAACCTCTTTGCCATGCAACTAGCCAGTGCCTCAATCCTACCCATGGTTCTCAAATCAGCCATTGAGCTAGATCTTCTAGAAATCATAGCAAAAGCTGGACCTGGAGTTCATCTTTCACCCACTGATATTGCTTCTAAGCTTCCAACATCAAACCCTGATGCACCAGTTATGCTAGACCGCATTTTGCGCCTCTTGGCTAGTTATAGTATCCTTACTTACTCCCTCCACACCCTTAATGATGGAAAGGTTGAGAGGCTATATGGTTTGGCTCCTGTAGCTAAGTACTTGGTTAAGAATGAAGATGGTGTTTCTCTTTCTGCTCTTAGTTTGATGAATCAGGATAAAGTACTCATGGAAAGCTGGTACTACTTGAAAGATGCAGTCCTTGAAGGTGGCATTCCATTTAACAAGGCATATGGAGTGACAGCCTTTGATTACCATGGCACAGATCCAAGGTTCAACAAGGTTTTCAATAAGGGAATGTCTGATCACTCTACCATCACAATGAAGAAAATTCTTGAAACCTACACAGGCTTTGAGGGTCTTAAATCTCTTGTTGATGTTGGTGGTGGGACTGGTGCTGTAATCAACAAGATTGTCTCAAAGTATCCAAAGTTAAAGGGAATTAATTTTGATTTGCCACATGTTATTGAAGATGCTCCTTCTTATCCAGGAGTGGAGCATGTTGGTGGAGACATGTTTGTCAGCATTCCAAAGGCTGATGCTGTTTTTATGAAGTGGATTTGTCATGACTGGAGTGATGAGCACTGCTTGAAGTTTTTGAAGAACTGTTATGAGGCACTTCCAGAGAATGGTAAGGTTATTGTGGCTGAATGCATTCTTCCTGTGGCTCCAGACACTAGCTTAGCCACAAAGGGTGTGGTTCACATTGATGTGATCATGTTGGCTCATAACCCTGGTGGGAAAGAGAGAACAGAGAAAGAGTTTGAGGCCCTGGCTAAGGGTGCTGGATTCAAAGGTTTCAGAGTTTTCACCAATGCTTTTAACACCTACATCATGGAATTTCTGAAGAAGGTTTAA 1098 0.4253 MGSTGETQITPTHVSDEEANLFAMQLASASILPMVLKSAIELDLLEIIAKAGPGVHLSPTDIASKLPTSNPDAPVMLDRILRLLASYSILTYSLHTLNDGKVERLYGLAPVAKYLVKNEDGVSLSALSLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGVTAFDYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINKIVSKYPKLKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPENGKVIVAECILPVAPDTSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFRVFTNAFNTYIMEFLKKV* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0778 365 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Lan3g0778 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 363 IPR016461 GO:0008168
Lan3g0778 365 Gene3D Vaccinia Virus protein VP39 116 363 IPR029063 -
Lan3g0778 365 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
Lan3g0778 365 CDD AdoMet_MTases 204 295 - -
Lan3g0778 365 PANTHER BNAA10G07270D PROTEIN 1 364 - -
Lan3g0778 365 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Lan3g0778 365 SUPERFAMILY "Winged helix" DNA-binding domain 15 119 IPR036390 -
Lan3g0778 365 Gene3D - 1 115 IPR036388 -
Lan3g0778 365 PANTHER O-METHYLTRANSFERASE 1 364 IPR016461 GO:0008168
Lan3g0778 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 361 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0778 Lan-Chr3 14476050 14479465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0778 1 365 Monolignol Biosynthesis Gene Families AT5G54160 77.260 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0778 K13066 - gmx:100780100 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0593 15 13386629 13392804 Lan3g0778 3 14476050 14479465 LSH