Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0774 ATGAGTTCTGTTGACCGTTGTTATCCACCCCGTGAAGAAGAAATGGCGGTTTTATCTCTCAATTCAGTACCTTTAGGGTTTCGATTTCGACCCACTGATGAGGAACTTATTGATTACTATCTCAGACGGAAGATTAATGGTAATTCTCAACAAGTTTGGGTAATTCGAGAAATCGATGTTTGTAAATGGGAGCCTTGGGATTTGCCTGATTTGTCTGTGGTAAGGAACAACGACCCAGACTGGTTCTTCTTTTGTCCACAAGACCGTAAGCATCCAAACGGGCATCGATTGAACCGAGCAACCGGTCATGGGTATTGGAAGGCAACGGGAAAGGATCGCAAAATCAAGTCTGGCTCTCTCTTGATTGGAATGAAGAAGACTCTAGTCTTCCACACTGGTCGCGCGCCTAAGGGAAAGAGGACCCATTGGGTTATGCATGAGTACCGTCCTACCCTCAAGGAGCTTGATGGTACCAATCCTGGACAGAATGCATATGTCCTTTGCCGATTATTTAAGAAACAAGATGAGAGTCTCGAAATTCCAAAATGTGGTGAAGTAGAACCGACTACTTCAGATCCTACGGCAGCCAATTCCTCTCCAGAAGAGATACATCCAGCTGTAGATGTGGTTTCAGGATCTCCATTGCAAGTTACTGATGATAAGCATCAAGGAGTTGTTCATGAGAAGTCTCAGGGTAAATTATCCAATGTCATAAACTCTGGTGATGGCCATAGTGACAGATATGATGCTTATGATGGACAAAATCAAACTCAGGAACTTGCTGCAAAGGAGGAAGAACAATGGAAAGAGTGGTTGAACTTCGATGAGGAAGAACAGTGTTTGAACCTTGATGTAATTTTCGACCCCAAAACCGAGCTATTAGATGCCGATTTATTCTCTCCATTAAAAACACATATTCCAACAGATTTTTCTTTTCAAGCAAACAATGAATCAGATGGTCTTTGTGCAGATGAGACAAATATTTCAGACTTCTTTGATTCAGTTGTTAACTGGGACGAAGTGTTGTGTGAGAACTCTGCCAGTGATAAGCAGAAGAGCAATATTGGGTTATCTCAAAATGATCGGAAGATGGCTTCCCCACCGGATGTTATTAGTATCGACCATGTTTTCAATGTAGCCAATGATTCTGAGCAACCAACAAACTATAATAATACGGTTCCTAGCGGCGATACTGGAATCAAGATAAGGACTCAACAGATGCAAAACGAACAGGCAAAAGGGTGTATAAACTATCAAAATAGTATGGTTGCTAGTGCTGATGCTGTAATCAGGAGAAGGACTCGACAGGTACGAAATGAACAACCAAATAGGAACTTTGCAGAGAAAGGTACTGCACAAAATAGAATTCGCTTGGTTAGTCAGATGGCATTTCACTCAAGCTGTGCACTGGAAGGGCATAATTTAAAAGCAGACACTGAAGGGGAGAAGAAAGCTTCAGAAAATCATGCTGCTGATGAGAGTTCTACTGCTACTAGCATGGTGAAAGAACCCGAGTCAACTGACAGTAGAAAGATTTCTCTACAAGTTTCAAATGCCGGTTTGGTCTTGCGATTAAAAGACATCTTATTGCTTAGAAGGGTTCCTTTTGTGTCAAAGACGACCTCCAATCTTTTCATGTGGTCTTATGTTATTATAGTTTCTTCTGTTGCAGTGGTCTCATTAGTGCTCTTTGCTAGCATGTGGGGATATGTTTAA 1716 0.4172 MSSVDRCYPPREEEMAVLSLNSVPLGFRFRPTDEELIDYYLRRKINGNSQQVWVIREIDVCKWEPWDLPDLSVVRNNDPDWFFFCPQDRKHPNGHRLNRATGHGYWKATGKDRKIKSGSLLIGMKKTLVFHTGRAPKGKRTHWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESLEIPKCGEVEPTTSDPTAANSSPEEIHPAVDVVSGSPLQVTDDKHQGVVHEKSQGKLSNVINSGDGHSDRYDAYDGQNQTQELAAKEEEQWKEWLNFDEEEQCLNLDVIFDPKTELLDADLFSPLKTHIPTDFSFQANNESDGLCADETNISDFFDSVVNWDEVLCENSASDKQKSNIGLSQNDRKMASPPDVISIDHVFNVANDSEQPTNYNNTVPSGDTGIKIRTQQMQNEQAKGCINYQNSMVASADAVIRRRTRQVRNEQPNRNFAEKGTAQNRIRLVSQMAFHSSCALEGHNLKADTEGEKKASENHAADESSTATSMVKEPESTDSRKISLQVSNAGLVLRLKDILLLRRVPFVSKTTSNLFMWSYVIIVSSVAVVSLVLFASMWGYV* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0774 571 MobiDBLite consensus disorder prediction 476 509 - -
Lan3g0774 571 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Lan3g0774 571 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 16 479 - -
Lan3g0774 571 MobiDBLite consensus disorder prediction 476 490 - -
Lan3g0774 571 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 479 - -
Lan3g0774 571 Gene3D NAC domain 32 177 IPR036093 GO:0003677|GO:0006355
Lan3g0774 571 SUPERFAMILY NAC domain 15 173 IPR036093 GO:0003677|GO:0006355
Lan3g0774 571 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0774 Lan-Chr3 14430821 14436813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0774 15 417 NAC Transcription Factor Family AT4G35580 41.986 1.93e-89 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan3g0774 NAM 5.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0774 - - lang:109338230 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0583 15 13217545 13221215 Lan3g0774 3 14430821 14436813 LSH
Lan11g0409 11 2994186 2997950 Lan3g0774 3 14430821 14436813 PCT
Lan9g1168 9 19107534 19110788 Lan3g0774 3 14430821 14436813 PCT
Lan3g0774 3 14430821 14436813 Lan11g0409 11 2994186 2997950 PCT
Lan3g0774 3 14430821 14436813 Lan9g1168 9 19107534 19110788 PCT