Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0767 ATGGAGAGTCTGAAAGCTTCGATTCCAGAAGGCCTGAAACAAATGATATCAGAGAGCAGCGTCGATGATCTTTCCACAACTTGTTCATATCTCCACCGTTTTTTTCTTCGTTTCAATCCATTTCATCACATGATTACCGAATTGGCAGACCCAAAGTATGGTTTATGTGGTAAGAGTAAGCACGATGCTTTGGAATCTAAGCAGCTTGGTAATCAGTGTTTTTTAGACAAAGATTATGTCAAGGCTTTGAATTTCTACACTCAGGCATTGCGTAAGGCTCCTTTTGAAGATGGTGACATGGAAAATAATCTGGTTGCGACGTTATATGTCAATCGAGCCACTGTATTGCATAAAATGAGTCTTTTGGTGGAGTGTTTGCGAGATTGCACTCGAGCTCTCCAGATATGCCCAAGCCATGCAAAGGCATGGTATAGGAGAAGCCAGGCAAATGCTTCATTGGGAAATTATAAAGACGCGATCTGTGACCTAAATGTGGCTAAAAGTATGGAATCATCATTGGGTGGGAAGAGGAAAATTGAAAATGAACTGAAAAGTATTTTAGACCAATGCAAGAGCGCAAGTATGGCAGTAAAGCACAGCGGGAACTGCTTGAATACAGTGGATGAGATGCCCCAAATAAAGCTACAGTGTGTCACGATTCCTGATAAAGGTAGAGGCATGGCATCATCGTGTGACATTTTACCAGGTTCTTTGCTTCATACTGAAGAACCTTATGCTATGGTAATATCAAAGCAATGCCGGGAAACTCATTGTCATTATTGCTTGAATGACCTACCAGCTGATAGAGTTCCTTGTATATCGTGTTCAATACCACTGTACTGCTCCCAGCAATGCCAGATAAAGGCAGGCGGGCAAATGTTCAGGATTTATCCAGAAATTCATGGCATTCTTAAAAGTTTACCCATAGATATTGGAGAATATGCTGCAGAAGTTATTCAATTCAATGATTCTGAACAAGAAATTGAGAATATTTCTGAACATAAACTTGAATGTCAAGGTGTAAATTGGTCTGCAGTACTGCCATCTGAAATAGTTTTGGCTGGCCGGATACTAGCAAGGTTTTTGCCAAAGAGCGCATCTGAAGATATTAAAGACTTTGTGGATGGGCTGGAGCTTTCTCATTGTTATAAACATATGCCATCTGAAAGCAAATTGGACTCACATATACACGCCATTGTGTTGTTATACTGTCTTCAACACTCTAGTAGCATCGTGTTTCCCATAGATGGAGTGTCTTTGTCACAGGTTGTCATTATTATTTCTCAAATTAAAGTGAATTGTATGACCATTGTTCGTTTAAAGTCAATAGATGCTCATGTGCTATCAGACCAGTTTGGAGAATTTCCGTCCAATGCATATTTAACTAGTAATGTGGAACAGGTTAGAGTGGGAAAAGCTATTTATAAAACTGGCAGTTTATTCAACCATTCTTGCCAACCAAATATTCATGCATATTTTCTTTCACGTAGTCTATGTATACGAACAACAAAATTTATAGCAGCTGGGTGTGAGCTGGAATTATCTTATGGTCCACAGGTAGGGTTGTTGGTTTGTAAAGATCGCCTTAACTTACTCAAAGATGAGTATGCCTTTCAGTGTCAATGTACTGGTTGTTCAGAAGCCAATTTGTCTGACATTGTCCTTAATGCTTTTCATTGTGTCAATCCAAACTGTTCGGGCGCAGTGTTGGATAGCAGAGTCGTTGACTGTGAAAAGCAGAAGATCAAGCGCTTCCCTATTGCTGATGAAGCAGACAAGAACAGTGACATTTATGAAGTGTGTATTCGTGCATTCAGCCAAAGCGATGCCTCCATTCCTATCCAACCTGGATACTGCTTGAAATGTGGTTCTTACTGTGATTTGGGGTCTTCACATGCTGCAGTTGATAAAGCTTTAACATGCATAAAGAGGTTGCAGGATGCAATACTGACGAAAGAGATTTCAAATACAACTATTACAGAAGCTTCAAAATTTCTTCATTTGCTAAGATCAAATTTGCATGCATACAACAAGCTTATTGCAGAGGTAGAGGACAACCTTGCCCAGGCTTTTTGTTTATTGGGGGAATTAGAACTGTGTATGGACCATTGTAAAGCATCAATTCAGATTCTGGAGAAGCTATATGATCCTGATGATATTGTTATTGCTTATGAACTTGTGAAGTTTTCTTCCATCCAACTTTCCTTGGGTGATGTTACTGCTGTGGACAGCATAAGCAGAATAGGTGATATCTTCTCACGTTATTATGGACTTCATGCAGACTTGGTCTTCCCATATCTTAGATACCTTAGGGGAGAAATTAAAAAAAAATCAGTTGAGTGTACCTAA 2349 0.3951 MESLKASIPEGLKQMISESSVDDLSTTCSYLHRFFLRFNPFHHMITELADPKYGLCGKSKHDALESKQLGNQCFLDKDYVKALNFYTQALRKAPFEDGDMENNLVATLYVNRATVLHKMSLLVECLRDCTRALQICPSHAKAWYRRSQANASLGNYKDAICDLNVAKSMESSLGGKRKIENELKSILDQCKSASMAVKHSGNCLNTVDEMPQIKLQCVTIPDKGRGMASSCDILPGSLLHTEEPYAMVISKQCRETHCHYCLNDLPADRVPCISCSIPLYCSQQCQIKAGGQMFRIYPEIHGILKSLPIDIGEYAAEVIQFNDSEQEIENISEHKLECQGVNWSAVLPSEIVLAGRILARFLPKSASEDIKDFVDGLELSHCYKHMPSESKLDSHIHAIVLLYCLQHSSSIVFPIDGVSLSQVVIIISQIKVNCMTIVRLKSIDAHVLSDQFGEFPSNAYLTSNVEQVRVGKAIYKTGSLFNHSCQPNIHAYFLSRSLCIRTTKFIAAGCELELSYGPQVGLLVCKDRLNLLKDEYAFQCQCTGCSEANLSDIVLNAFHCVNPNCSGAVLDSRVVDCEKQKIKRFPIADEADKNSDIYEVCIRAFSQSDASIPIQPGYCLKCGSYCDLGSSHAAVDKALTCIKRLQDAILTKEISNTTITEASKFLHLLRSNLHAYNKLIAEVEDNLAQAFCLLGELELCMDHCKASIQILEKLYDPDDIVIAYELVKFSSIQLSLGDVTAVDSISRIGDIFSRYYGLHADLVFPYLRYLRGEIKKKSVECT* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0767 782 Gene3D Tetratricopeptide repeat domain 42 198 IPR011990 GO:0005515
Lan3g0767 782 Pfam SET domain 454 517 IPR001214 GO:0005515
Lan3g0767 782 SUPERFAMILY TPR-like 63 712 IPR011990 GO:0005515
Lan3g0767 782 SUPERFAMILY SET domain 216 542 IPR046341 -
Lan3g0767 782 SMART tpr_5 106 139 IPR019734 GO:0005515
Lan3g0767 782 SMART tpr_5 681 714 IPR019734 GO:0005515
Lan3g0767 782 SMART tpr_5 63 96 IPR019734 GO:0005515
Lan3g0767 782 SMART tpr_5 140 173 IPR019734 GO:0005515
Lan3g0767 782 ProSiteProfiles SET domain profile. 213 517 IPR001214 GO:0005515
Lan3g0767 782 Gene3D SET domain 426 516 IPR046341 -
Lan3g0767 782 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 773 - -
Lan3g0767 782 Coils Coil 666 686 - -
Lan3g0767 782 Gene3D Tetratricopeptide repeat domain 523 778 IPR011990 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan3g0767 SET 3.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0767 K24634 - gmx:100783548 1190.64