Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0762 ATGAAGTTGCATTTCTCTATTGTTTCACTTGTTCTGCTAATAGTCATACTAACTCTCCTTGGCTTAGTTGTGGGTGACTTAAACTCTGACGCGCAAACTCTCTTGGAGTTTTCTTTTAGTGTCTCACATGGCCCAAGGCTAAACTGGAATGACACTTCTTCAATTTGCACCTCATGGATTGGTGTGACTTGCAACTCGAATCGATCTCGTGTCATTGGCCTAGCTCTTCCAGGAATTGGACTAACAGGTTCGATTCCAGAGAACAACATAGAAAAACTTGATGCTCTTAGGGTCCTGAGCCTTCATTCCAATGGCCTAAAAGGAAACCTTCCTTCTAACATCCTCTCCATCCCTTCACTCCAATTTGCACACTTGCAGCACAACAAATTCTCAGGTCCAATTCCTTCTTCTGTCTCTCCTAAACTCATTGCCTTAGATATTTCCTTCAACTCTTTTTCTGGCCCAATTTCACCTGCATTTCAGAACCTCAGAAGACTCACTTGGTTTTATCTTCAAAACAATTTAATATCCGGCGCTATCCCCAACTTCAATCTTCCAAGGCTCAAATATTTGAATTTGAGCTATAACAACTTGAATGGCACAATTCCAAATGCCGTCAAGACATTCCCTTATACTTCTTTTGTTGGTAACTCTCTCTTATGTGGTCCACCTCTCAATCATTGCTCTTCAATCTCCCCTTCTCCATCTCCTTCTGCTGTTTACCAGCCACTCTCTCCATCAACCACCCAAAATCAAGAAACTACGACTCATAAGAAAAAGTTTGGCCTAGCTCCTATACTTGCTCTAGTCATAGGAGGTATTGCCTTCATCTCTCTGCTGGTTTTAGTGATCATAGTTTGCTGTTTTAAGACTAAAAACAGTAAAAGCAGTGGCATACTGAAAGGAAAGGCATCATCTTGTGCTGGAAAGACCGAGGTTTCGAAAAGTTTCGGGAGTGGCGTGCAAGAGGCTGAAAAGAACAAGTTGTTTTTCTTTGAAGGATGCTCTGATAGCTTTGACCTTGAGGATTTACTAAAGGCTTCCGCTGAAGTTCTTGGAAAAGGGAGCTATGGTACAGCATATAAGGCTGTTTTGGAGGAAGGAACAACGGTCGTAGTTAAAAGGTTGAGGGAAGTTATGGTAGGAAAGAAGGAGTTTGAGCAGCAGATGGAGATTGTTGGGAGAATCGGATGCCACACCAATGTCATGCCTCTTCGAGCTTATTACTATTCGAAAGATGAGAAGCTTCTAGTTTACAACTACATGCCAGGGGGAAGCTTGTTTTTCTTGTTGCATGGAAACAGCGGTAGTGCAGGAAGAACTCCACTAGATTGGGACTCCAGAGTGAAGATTTCACTTGGAGCAGCCAAGGGAATTGTTTTCATTCACTCTCAAGGGGGTCCAAAATTCACACATGGCAACATCAAGTCCACCAATGTGCTCATAAACCAAGACTTCGATGCATGCATCTCCGATACCGGATTGTGTCCTCTAATGAACACACCAGCAGCCATGTCTAGACTCAATGGCTATAGAGCTCCAGAAGTAACAGACTCCAAGAAAATCACTCAGAAATCTGATGTTTACAGCTTCGGCGTGCTGCTTCTCGAAATGCTCACAGGCAAGACTCCACTAAGATATCCTGGCTATGAAGAAGTGGTTGATCTTCCAAGGTGGGTGAGGTCTGTTGTTAGAGAGGAATGGACTGCTGAAGTATTTGATGATGAGCTTCTTAGAGGTCACTGTGTTGAAGAGGAAATGGTGCAAGTGCTTCAAATTGCACTGGCATGTGTTGCTAATGTGCCAGATATGAGGCCTAGAATGGATGAAGTTGTTAGAATGATTGAAGAAATTAAGCATCCTGAGATGAAGAACATGCCATCATCTGAGTCTGAGTCAAATGTGCCAACACCATAA 1917 0.4293 MKLHFSIVSLVLLIVILTLLGLVVGDLNSDAQTLLEFSFSVSHGPRLNWNDTSSICTSWIGVTCNSNRSRVIGLALPGIGLTGSIPENNIEKLDALRVLSLHSNGLKGNLPSNILSIPSLQFAHLQHNKFSGPIPSSVSPKLIALDISFNSFSGPISPAFQNLRRLTWFYLQNNLISGAIPNFNLPRLKYLNLSYNNLNGTIPNAVKTFPYTSFVGNSLLCGPPLNHCSSISPSPSPSAVYQPLSPSTTQNQETTTHKKKFGLAPILALVIGGIAFISLLVLVIIVCCFKTKNSKSSGILKGKASSCAGKTEVSKSFGSGVQEAEKNKLFFFEGCSDSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLREVMVGKKEFEQQMEIVGRIGCHTNVMPLRAYYYSKDEKLLVYNYMPGGSLFFLLHGNSGSAGRTPLDWDSRVKISLGAAKGIVFIHSQGGPKFTHGNIKSTNVLINQDFDACISDTGLCPLMNTPAAMSRLNGYRAPEVTDSKKITQKSDVYSFGVLLLEMLTGKTPLRYPGYEEVVDLPRWVRSVVREEWTAEVFDDELLRGHCVEEEMVQVLQIALACVANVPDMRPRMDEVVRMIEEIKHPEMKNMPSSESESNVPTP* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0762 638 SUPERFAMILY Protein kinase-like (PK-like) 350 618 IPR011009 -
Lan3g0762 638 Pfam Protein kinase domain 350 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0762 638 SUPERFAMILY L domain-like 39 226 - -
Lan3g0762 638 CDD STKc_IRAK 352 618 - -
Lan3g0762 638 ProSitePatterns Protein kinases ATP-binding region signature. 352 383 IPR017441 GO:0005524
Lan3g0762 638 Gene3D Ribonuclease Inhibitor 29 140 IPR032675 -
Lan3g0762 638 Gene3D Phosphorylase Kinase; domain 1 311 421 - -
Lan3g0762 638 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Lan3g0762 638 ProSiteProfiles Protein kinase domain profile. 346 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0762 638 PANTHER OS05G0588300 PROTEIN 3 636 - -
Lan3g0762 638 MobiDBLite consensus disorder prediction 619 638 - -
Lan3g0762 638 Gene3D Transferase(Phosphotransferase) domain 1 422 635 - -
Lan3g0762 638 Gene3D Ribonuclease Inhibitor 141 230 IPR032675 -
Lan3g0762 638 PANTHER RECEPTOR-LIKE KINASE 3 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0762 Lan-Chr3 14198443 14203092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0762 12 633 Receptor kinase-like Gene Family AT5G58300 58.880 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan3g0762 Pkinase 2.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0762 - - aprc:113868460 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0723 15 16104112 16106798 Lan3g0762 3 14198443 14203092 LSH
Lan11g0424 11 3106471 3110454 Lan3g0762 3 14198443 14203092 PCT
Lan3g0762 3 14198443 14203092 Lan11g0424 11 3106471 3110454 PCT