Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0758 ATGAGTTCTTCTTCTTGGTCTTCTTCAAATTGGGTAATGGAAAGTGGTGATATTCCTCATGTTTTGGCTGTTGATGACAACCTTATTGATCGGAAACTTGTTGAGAAGCTGCTTAGGAACTCTGCTTGCAAAGTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTCTTGGGCTTGACAAGTGGTGAACATAACACCTTGAATGGGAGATCCAAAGTAAATTTGGTTATCACAGATTATTGCATGCCAGGAATGACAGGCTATGAGCTACTTAAGAAAATTAAGGAATCATCTATGATGAAGGAGGTTCCAGTTGTTATAATGTCATCTGAGAACATACCAACAAGGATTGACAAGTGTATGGAAGAAGGAGCTCAAATGTTCATCTTGAAGCCTCTCAAGCAATCTGATGTGAAAAAACTAACATGTGAGTTAATGAATAGGGATTGTGAAATTTAG 462 0.3874 MSSSSWSSSNWVMESGDIPHVLAVDDNLIDRKLVEKLLRNSACKVTTAENGPRALEFLGLTSGEHNTLNGRSKVNLVITDYCMPGMTGYELLKKIKESSMMKEVPVVIMSSENIPTRIDKCMEEGAQMFILKPLKQSDVKKLTCELMNRDCEI* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0758 153 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 149 IPR045279 GO:0009736
Lan3g0758 153 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 8 149 - -
Lan3g0758 153 SMART REC_2 19 143 IPR001789 GO:0000160
Lan3g0758 153 SUPERFAMILY CheY-like 19 148 IPR011006 -
Lan3g0758 153 Pfam Response regulator receiver domain 21 141 IPR001789 GO:0000160
Lan3g0758 153 ProSiteProfiles Response regulatory domain profile. 20 147 IPR001789 GO:0000160
Lan3g0758 153 CDD REC_typeA_ARR 21 142 - -
Lan3g0758 153 Gene3D - 20 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0758 Lan-Chr3 14165037 14167165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0758 20 148 Response Regulator Gene Family AT3G56380 71.756 1.97e-62 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan3g0758 Response_reg 7.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0758 K14492 - gmx:100778707 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0558 15 12863003 12864962 Lan3g0758 3 14165037 14167165 LSH
Lan2g0950 2 20464768 20465864 Lan3g0758 3 14165037 14167165 PCT
Lan11g0440 11 3236695 3237892 Lan3g0758 3 14165037 14167165 PCT
Lan9g1137 9 18739229 18740228 Lan3g0758 3 14165037 14167165 PCT