Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0757 ATGCTTGCTTTTTCAAACATGAGAGCTATTTTTCTGTGCTTGTTATTTTTTGTTCTTGTGCTAGTGGTTGCTATAACTGCAGTGAGTCCGTCTCTGAATGACGATGTTTTGGGTTTAATTGTGTTCAAAGCTGACTTACAAGATCCAATGGGAAAGCTCGCGTCATGGAATGAAGACGATGAGAGCGCGTGTGGTGGTAATTGGGTTGGAGTGAAGTGCAATTCTAGATCAAATAGGGTTACTGAGATTAACCTTGATGGGTTCTTACTCAATGGAAAGATTGGCATAGGTTTGTTAAGGTTGCAGTTTTTAAGGAAGCTTTCTTTGTCAAGAAACAATCTTACTGGGGGAATTAGCCCCAACATTGCGCGGATCGATAGCCTTCGTGTTATCGATTTGAGTGATAATAATCTTTCAGGGGAAGTTTCTGATGAGTTTTTCAAACAATGTGGGTCTCTGTGGACTGTTTCTCTTGCTAGGAACAAGTTTTCTGGGAAGATTCCACTTAGTTTGGGGTCATGTTCAGCTCTTGCTTCCATTGACCTTTCCTTTAATATGTTTTCTGGTTTGGTTCCTTCGGGGATTTGGACTTTGAGTGGACTCAGGTCACTGGATTTGTCTCAGAATATGTTGGAGGGTGAGATTCCGAAAGGGGTTGATGTGATGAAGAATTTGAGAAGCATTAGCTTGGCTAAGAATCAGTTTTCTGGAGAGGTTCCAAATGGGTTTGGAAGTTGCTTGCTTTTGAGGTCTATTGATTTTAGTGATAATTCTCTTTCTAGTAGCATACCTTGGGATTTGAAGGAACTCGCTTTGTGTAGTTACCTCAGTTTGAGTGGAAATGCTTTCTCAGGAGAGATTCCTGAGTGGATTGGAGAAATGAAAGGCCTCCAGACATTGGACTTATCACAAAATGGATTTTCTGGCCAGGTGCCGGATTCTATAGGTAATCTTCCATCGTTGAAGATGTTGAATTTGTCTGCAAATGGTTTCACTGGTAATCTGCCAGAGTCGATGGCGAACTTGTCAAACCTTTTGGCATTGGATGTCAGCCAGAATTCAATGTCTGGAGGTCTTCCGTTGTGGATTTTCAAGTCAGGTGTGGAGAAGGTTTTAGTATCAGAAAGCAGACCGAGTGGTGGCATGAAAAGCACTTTTTATTCGTTGGCTGAAGTTGCGATTCAAAGTATTCAAGTTTTGGATTTATCTGACAATGCATTTTCCGGAGAAATCACTTCTGCTATTGCAGCTTTAAGCAGTTTGCAGTTTTTGAATTTATCAAATAACTCTCTTGGAGGCTCTATACCAGCTGCAATCGGTGAATTAAAAACATTAGAAGGCCTTGATTTGAGTTGTAATAACTTAAGTGGATACATACCATGGGAAATAGGAGGAGTTATGATGTTGAAGGAACTGAGATTGGAAAAGAACTCCCTTGTCGGGAAAATTCCATCCTCAATTGAGAATTGCTCCTCGTTATCAACTTTGAATTTGTCCCAGAACAGACTGAGTGGCCCGATACCTGCGGCACTTGCTAAACTTAGCAACCTGCAAACTGTGGACTTATCATTGAACAGCCTTACTGGAAACCTGCCTAAGCAATTGGCCAACCTTCCGAATCTTCGTTCCTTTAATTTATCTCACAATAATATCCAAGGTGAATTGCCTGGCGGAGGCTTCTTTAATACCATCCCAACTTCTTCTGTTGCTGGAAATCCATCTCTTTGTGGCGCTGCCGTGAATAGATCTTGCCCTACTGTTCTCCCAAAGCCTATTGTTCTAAATCCCAACACTACTACTGACTCTGGCTCAGGTTCAATGTCTCCAACTTTGGGTCACAGAAGAATCATTCTCAGCATTTCTGCGCTCATTGCCATTGGTGCAGCTGTTGTCATTGTAATCGGTGTCATTGGCATCACTGTTCTTAATCTTCGTGTTCGGTCCTCTGCTGAGAGATCTCCTGCTGCTATCACATTTTCTGCCGGGGACGAATTCAGCCAATCCCCAACTACAGATGCCAACTCTGGAAAGCTTGTCATGTTTTCAGGTGAGCCTGAATTCAGTTCTGGAGCACATGCTTTGCTTAATAAGGATTGTGAACTTGGGCGAGGAGGGTTTGGGGCAGTGTACCAAACAGTTCTTAGAGATGGGCGTTCGGTAGCTATAAAGAAGCTCACCGTATCAAGCCTTGTCAAGTCTCAAGAAGATTTTGAAAGAGAAGTGAAGAAATTAGGAATAATCAGGCACCAAAATCTTGTCAAACTTGAAGGTTATTATTGGACTCCATCTCTGCAGCTCCTCATATACGAGTATGTCTCCGGTGGTAGTCTATATAAGCATCTCCATGAAGGATCAGGCGGAAACTTCCTCTCATGGAATGAAAGGTTTAATGTGATTCTTGGGACAGCAAAGGCCTTGGCTCACTTGCACCACTCCAACGTTATTCACTATAACATCAAGTCAATGAATGTCCTTATTGACAGCTATGGCGAACCTAAAGTGTGTGACTATGGTCTAGCAAGGCTGTTACCAATGCTTGACCGATATGTTTTGAGCAGCAAAATTCAAAGCGCACTCGGCTACATGGCCCCAGAGTTCGCCTGCAGAACGGTGAAAATTACTGAGAAATGTGATATTTATGGGTTCGGAGTTTTGGTTCTAGAGATAATTACAGGGAAGAGGCCGGTTGAATATATGGAAGACGATGTGGTCGTACTTTGTGACATGGTGAGGGGAACTTTGGAAGAAGGCAGGGTTGAGGAATGCATCGATGAGAAGCTTCGAGGGAAGTTTCCTGCAGAAGAGGCTATTTCTGTGATGAAGCTTGGTTTAATATGTACTTCACAAGTTCCATCTAATAGGCCTGACATGGGAGAGGTAGTTAATATATTGGAGCTTATAAGATGTCCTTCAGAAGGACAGGAGGAGTTGGGATGA 2937 0.4263 MLAFSNMRAIFLCLLFFVLVLVVAITAVSPSLNDDVLGLIVFKADLQDPMGKLASWNEDDESACGGNWVGVKCNSRSNRVTEINLDGFLLNGKIGIGLLRLQFLRKLSLSRNNLTGGISPNIARIDSLRVIDLSDNNLSGEVSDEFFKQCGSLWTVSLARNKFSGKIPLSLGSCSALASIDLSFNMFSGLVPSGIWTLSGLRSLDLSQNMLEGEIPKGVDVMKNLRSISLAKNQFSGEVPNGFGSCLLLRSIDFSDNSLSSSIPWDLKELALCSYLSLSGNAFSGEIPEWIGEMKGLQTLDLSQNGFSGQVPDSIGNLPSLKMLNLSANGFTGNLPESMANLSNLLALDVSQNSMSGGLPLWIFKSGVEKVLVSESRPSGGMKSTFYSLAEVAIQSIQVLDLSDNAFSGEITSAIAALSSLQFLNLSNNSLGGSIPAAIGELKTLEGLDLSCNNLSGYIPWEIGGVMMLKELRLEKNSLVGKIPSSIENCSSLSTLNLSQNRLSGPIPAALAKLSNLQTVDLSLNSLTGNLPKQLANLPNLRSFNLSHNNIQGELPGGGFFNTIPTSSVAGNPSLCGAAVNRSCPTVLPKPIVLNPNTTTDSGSGSMSPTLGHRRIILSISALIAIGAAVVIVIGVIGITVLNLRVRSSAERSPAAITFSAGDEFSQSPTTDANSGKLVMFSGEPEFSSGAHALLNKDCELGRGGFGAVYQTVLRDGRSVAIKKLTVSSLVKSQEDFEREVKKLGIIRHQNLVKLEGYYWTPSLQLLIYEYVSGGSLYKHLHEGSGGNFLSWNERFNVILGTAKALAHLHHSNVIHYNIKSMNVLIDSYGEPKVCDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITEKCDIYGFGVLVLEIITGKRPVEYMEDDVVVLCDMVRGTLEEGRVEECIDEKLRGKFPAEEAISVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELG* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0757 978 Gene3D Phosphorylase Kinase; domain 1 686 771 - -
Lan3g0757 978 PRINTS Leucine-rich repeat signature 201 214 - -
Lan3g0757 978 PRINTS Leucine-rich repeat signature 418 431 - -
Lan3g0757 978 SMART LRR_typ_2 294 318 IPR003591 -
Lan3g0757 978 SMART LRR_typ_2 538 562 IPR003591 -
Lan3g0757 978 SMART LRR_typ_2 198 222 IPR003591 -
Lan3g0757 978 SMART LRR_typ_2 125 149 IPR003591 -
Lan3g0757 978 SMART LRR_typ_2 418 442 IPR003591 -
Lan3g0757 978 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 7 976 - -
Lan3g0757 978 Pfam Leucine Rich Repeat 420 441 IPR001611 GO:0005515
Lan3g0757 978 Pfam Leucine Rich Repeat 469 490 IPR001611 GO:0005515
Lan3g0757 978 Gene3D Ribonuclease Inhibitor 314 588 IPR032675 -
Lan3g0757 978 Gene3D Ribonuclease Inhibitor 32 94 IPR032675 -
Lan3g0757 978 Gene3D Ribonuclease Inhibitor 95 313 IPR032675 -
Lan3g0757 978 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Lan3g0757 978 SUPERFAMILY L domain-like 240 569 - -
Lan3g0757 978 SUPERFAMILY L domain-like 63 313 - -
Lan3g0757 978 ProSiteProfiles Protein kinase domain profile. 695 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0757 978 Gene3D Transferase(Phosphotransferase) domain 1 772 976 - -
Lan3g0757 978 CDD STKc_IRAK 701 967 - -
Lan3g0757 978 Pfam Leucine rich repeat 288 330 IPR001611 GO:0005515
Lan3g0757 978 Pfam Leucine rich repeat 492 551 IPR001611 GO:0005515
Lan3g0757 978 Pfam Protein tyrosine and serine/threonine kinase 697 964 IPR001245 GO:0004672|GO:0006468
Lan3g0757 978 ProSitePatterns Protein kinases ATP-binding region signature. 701 724 IPR017441 GO:0005524
Lan3g0757 978 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 976 - -
Lan3g0757 978 SUPERFAMILY Protein kinase-like (PK-like) 699 962 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0757 Lan-Chr3 14125078 14129282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0757 10 978 Receptor kinase-like Gene Family AT3G56370 65.949 0.0 1245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lan3g0757 PK_Tyr_Ser-Thr 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0757 - - gmx:100791629 1518.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0556 15 12814816 12819274 Lan3g0757 3 14125078 14129282 LSH