Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0755 ATGGAAGCTAATGGTGTTGATCCTTGTTCCTCTGAAGCTTCTAGCATTTCAGCCAATTCTGATGATCAAAAGATGAACCGGAAAGAGAAGGGTGTAAAGTCTGAACTGGATCAAGCTTCAATTTCCAACTCTTCCATGCAGCTTTTGGATTTCATGAAGCTTAATTCCAATGATAATTTGGTTAGTGATTCAAGGGCAGAACTTGATTTATTAAACCAAACAGGTAACAATAACTTGGTTGGTTCATCTTCTAGGGTTAATAATAAGAACAGCATTGCTGAAGTTACTGATGAAAACACAAAGATTGAGGCAAAGTCTTTCTCATGCAACTTTTGCAAGAGAGAGTTCTCGTCTTCACAAGCTTTGGGAGGGCACCAAAACGCACATAAACAAGAGCGTGCTCTTGCGAAACGACGTCAAGGCCTTGATGCTAGTGGTGGTTTCGGACACCCTCATTATCCTTATTACCCTTCTTATCCAACTCTTTCAACTCATTCCTTTTATGGGTCTTACAATAGGGCACTCGGGGTTCGAATGGATTCCATGATTCATAAGCCTTCATACCCTTCTTGGGCATCACCTAGTGGATTTAGTAGGTATGGTAGCCCTTGGTTAAGGCAAGGAGGCCGAGAGATGTTGAATTCTTCATCATCAACACTTGATAGGTTAAGAAGTGAGGGTTTTCAATTGCAATCACAATCGCAATCCCATGTTGATGGTGGGGGACGTGGATTCTTTATTGGAAGTAATGCAACTTCAAGCATAAAAGATAATGATGGAAATAATGCTAGTACCGAAACACTTTCTCTTTCAACAAATATTGCTACCACTTCATCGAGCCAAGTTATAAACAAACCAAGTCAATTATTAACGGTGGGGGATCCTGCTCCAGAAGGAATTTCCAAAGCAGAATCTTCAGATGATCTTGATTTGTCACTTAAGCTTTAA 948 0.403 MEANGVDPCSSEASSISANSDDQKMNRKEKGVKSELDQASISNSSMQLLDFMKLNSNDNLVSDSRAELDLLNQTGNNNLVGSSSRVNNKNSIAEVTDENTKIEAKSFSCNFCKREFSSSQALGGHQNAHKQERALAKRRQGLDASGGFGHPHYPYYPSYPTLSTHSFYGSYNRALGVRMDSMIHKPSYPSWASPSGFSRYGSPWLRQGGREMLNSSSSTLDRLRSEGFQLQSQSQSHVDGGGRGFFIGSNATSSIKDNDGNNASTETLSLSTNIATTSSSQVINKPSQLLTVGDPAPEGISKAESSDDLDLSLKL* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0755 315 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 7 315 - -
Lan3g0755 315 SUPERFAMILY beta-beta-alpha zinc fingers 104 134 IPR036236 -
Lan3g0755 315 Gene3D Classic Zinc Finger 81 145 - -
Lan3g0755 315 ProSitePatterns Zinc finger C2H2 type domain signature. 109 129 IPR013087 -
Lan3g0755 315 ProSiteProfiles Zinc finger C2H2 type domain profile. 107 134 IPR013087 -
Lan3g0755 315 MobiDBLite consensus disorder prediction 286 315 - -
Lan3g0755 315 MobiDBLite consensus disorder prediction 1 37 - -
Lan3g0755 315 MobiDBLite consensus disorder prediction 301 315 - -
Lan3g0755 315 PANTHER ZINC FINGER PROTEIN JAGGED 7 315 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0755 Lan-Chr3 14064095 14065042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0755 100 187 C2H2 Transcription Factor Family AT5G10970 55.056 1.47e-23 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan3g0755 None None None