Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0739 ATGGCTCCTCCAAAGCAAAGAACAGCTAGGGTTAGCAGAAACCCTGAATTGATTAGGGGAATTGGTAAATATTCAAGATCCAAAGTGTACCATAAGAGAGGTCTATGGGCAATCAAGGCTAAAAACGGCGGCGTTTTGCCCCGTCACGAGCCTAAGGCTAAGGCTGCAGCTCCTGCTGAGAAGGCACCTAAGTTCTACCCTGCTGATGATGTCAAGAAGCCACGTCTTAACAAACACAAACCTAAACCCACCAAGCTTAGGGCTAGTATCACACCAGGGACAGTGTTGATTCTTCTTGCTGGTCATTTCAAGGGAAAGAGAGTTGTGTTTCTCAAGCAGCTTCCTTCTGGCTTGCTTCTTGTAACTGGTCCTTTCAAGATTAATGGAGTTCCTTTGAGACGTGTGAATCAGGCCTATGTCATTGGCACATCAACCAAAGTAGATGTTTCTGCTGTTAATGTGGATAAATTTGATGACAAGTACTTCACAAAGGATGCCAAGAAAAAGAACAAGAAGGGAGAAGGAGAGTTCTTTGAGGCAGAGAAGGAGGAGAAAAATGTGCTCCCTCAGGAGAAGAAAGATGACCAGAAGACAGTGGATTCGGCTTTGTTGCAAGCCATTCAGAGTGTTCCAGACTTGAAGACTTACCTTGGTGCTAGGTTTTCCTTGAAGTCAGGCCAGAAGCCTCATGAGCTCCTCTTCTAG 705 0.4539 MAPPKQRTARVSRNPELIRGIGKYSRSKVYHKRGLWAIKAKNGGVLPRHEPKAKAAAPAEKAPKFYPADDVKKPRLNKHKPKPTKLRASITPGTVLILLAGHFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDVSAVNVDKFDDKYFTKDAKKKNKKGEGEFFEAEKEEKNVLPQEKKDDQKTVDSALLQAIQSVPDLKTYLGARFSLKSGQKPHELLF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0739 234 Gene3D - 88 172 IPR014722 -
Lan3g0739 234 PANTHER 60S RIBOSOMAL PROTEIN L6 4 234 - -
Lan3g0739 234 Pfam Ribosomal protein L6e 127 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lan3g0739 234 MobiDBLite consensus disorder prediction 67 86 - -
Lan3g0739 234 SUPERFAMILY Translation proteins SH3-like domain 88 178 IPR008991 -
Lan3g0739 234 PANTHER 60S RIBOSOMAL PROTEIN L6 4 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lan3g0739 234 CDD KOW_RPL6 82 234 IPR041997 -
Lan3g0739 234 Pfam Ribosomal protein L6, N-terminal domain 4 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0739 Lan-Chr3 13676245 13677911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0739 3 234 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 78.879 3.03e-119 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0739 K02934 - gmx:100785356 353.984