LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan3g0730	ATGGATACCTCTACTAATACGTGTGAGATAGTAGAAGAGTTGAATGTAGATGAAAATCCCGAGAGTAGTTATGCTCACAATTCAGGAAAAAATTATTCTATCGAAGATGATATTAATCGTCTTTTCCAAGCTATTGACATTAAAAATTCGCCTAGTACTTCACGTTCACAGAAGAATGCTATGAAAAGGCCAATAAAAGTCAGTTCATCTAAGGCATCGGGAATTGGCATCTCGGAGCCTGTAAGTTTGAAGCAGGCACTTAGAGGGCTGTGCATCTCTCAGGCATCAGAAATGGCTGCTTTGAAGAGACTGTCAAAGCCATGCAGTTCATCAAGAGTGTCGGAGGCTGGAACGATCACAAAGTTGTACACAGAAGTGGTAAATGAGGGGAAAGGGAACGTGGTGGAAATTTCCTTAGTGCAAGAGATTCCTGCACCTTCTGATCAATTGCCCAGTGTAGTGATATCAAAAGGAATGACAACCAGGTCAGCATCACGAGATCAGATTGTTCCTCTTCCATCAGAGATCGAGGATGAGAAGCCGATCACAGAGATTGGAGAACCAGTACATCCAACTCTCTCACCAGTTTCTTATGCAAATGAGGATGTCCCAGAGGTCAGAATGGGTCCTGCTCCTTCCACCAGAGTGCCTCTCAGTTCTTCAATGAGCGATAAGGGAGTAGAAGCAAATTTACATTGTGCTTCTCCATCTAGCTCTAGAATTGGCATCGAAGTGGATAAACCCACAAGCACTAATAAAAGTTTGGCAACACCATTATTCAACGGCAAGAACTTCTTTAAGAAAAAAATAAAGCAACATCTATGCTCTACCTCGAGCTGCTCCACTCCATGTTTGAGAAACGTTGACAGTGATCGGGGTGCTAGTACAAGTACTTTGGATACGGAGACTGGCAATTCTGATTTGAAGCATGAAATGAAAGAAAATGAGAAAACATCTCCATGCAGTTCAAACCACAGCATTGAAGTTAAGTCGATTAATCCTGGTATAGATTCGAGCAAGCCTGGCTTCGGTTTCAAATGCAATAACAGAACCAAGTTTCTAGTGACAAATATTGACAAGAAATCAAGATCGAAGGAAAAGAGTGAGTTCTCTCAAAGCTCAAGAAGTAGCATTGGTGAGTATAGTTGTAGCACGAGTATTAGTGGGGAGAGCAATCTAAGTGGTTCCAGTCGTGGTGGCCACAGGCCTCACATGTCAGAACACTTGAGATGGGAAGCTATTCGTGCTATTCAGCCGCAGCATGGCAACTTAAGTTTGAAGCAGTTCAAGCTATTACGGAGGCTTGGTAGTGGGGACATTGGAACTGTTTATCTTGCAGAATTAATTGGCACAAGCTGCCTTTTTGCACTGAAAGTGATGGACAACGATTTTTTGGCAAAACAGAAGAAAATGTTCAGGGCCCAAACCGAAAGAGAGATCCTGCAGATGCTGGATCATCCGTTTCTTCCTACGCTTTATTCCCACATTGCAACAGATAAGCTCTCCTGCTTGGTTATGGAATATTGTCCAGGTGGAGATCTACATGTATTGCGGCAGAGACAATCATATAGGAGTTTCTCAGAACAAGCAGCTAGGTTTTATGTTGCTGAGGTTCTTCTGGCACTGGAGTATTTGCACATGCTTGGAGTTGTATATAGAGATCTAAAGCCAGAAAATATTCTAGTACGAGATGATGGTCACATTATGCTGATCGATTTTGACTTGTCACTCAGGTGTTCTGTCAATCCAATGTTAGTCAAGTCATCCTCTCCCGACATGGATGCAACAAAGAAGATGTCTAGCCCTTGTTCAGAGGCTAGCTGCATACACCCTTTTTGTCTCCAACCAGATTGGCAAGTCTCCTGCTTTACTCCCATTCTTTTATCGGCCAGAACAAAATCTCGAAAGATGAAGGCTGATGCAACTGCTCAGGTTGGTCCACTGCCACAGCTTGTAGTGGAGCCTACAAGTGCCCGGTCTAACTCCTTTGTTGGAACCTATGAATATCTTGCTCCAGAGGTCATTAAAGGCAAAGTTCATGGGAGTTCCGTAGATTGGTGGACTTTTGGTATCTTTTTGTTTGAGCTTTTATATGGTAAGACTCCCTTCAAGGGGCCAACAAACGACGATACGTTAGCGAATGTTGTGTCACAAAGCCTTAAGTTCCCAAGTACTCCTATAATCAGTTTTCATGCAAGAGATTTGATCAAAGGATTGTTAATAAAGGATCCTGAAAATCGATTAGGTTTCGTAAAAGGCGCTGCTGAAATAAAGCAGCATCCCTTTTTTGAAGGCCTCAACTGGGCTCTAATACGGTGTGCAGCACCACCAGAGCTCCCCAAGTTTCACGATTTTGGAAGTAACGTTCCGTTTTTGGCTACTCATAAGGAGAATACAAATGGTTTAGAGGATATAGAAGATTGTGAGGAGTTTGAGCTGTTTTAG	2445	0.4278	MDTSTNTCEIVEELNVDENPESSYAHNSGKNYSIEDDINRLFQAIDIKNSPSTSRSQKNAMKRPIKVSSSKASGIGISEPVSLKQALRGLCISQASEMAALKRLSKPCSSSRVSEAGTITKLYTEVVNEGKGNVVEISLVQEIPAPSDQLPSVVISKGMTTRSASRDQIVPLPSEIEDEKPITEIGEPVHPTLSPVSYANEDVPEVRMGPAPSTRVPLSSSMSDKGVEANLHCASPSSSRIGIEVDKPTSTNKSLATPLFNGKNFFKKKIKQHLCSTSSCSTPCLRNVDSDRGASTSTLDTETGNSDLKHEMKENEKTSPCSSNHSIEVKSINPGIDSSKPGFGFKCNNRTKFLVTNIDKKSRSKEKSEFSQSSRSSIGEYSCSTSISGESNLSGSSRGGHRPHMSEHLRWEAIRAIQPQHGNLSLKQFKLLRRLGSGDIGTVYLAELIGTSCLFALKVMDNDFLAKQKKMFRAQTEREILQMLDHPFLPTLYSHIATDKLSCLVMEYCPGGDLHVLRQRQSYRSFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVRDDGHIMLIDFDLSLRCSVNPMLVKSSSPDMDATKKMSSPCSEASCIHPFCLQPDWQVSCFTPILLSARTKSRKMKADATAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEVIKGKVHGSSVDWWTFGIFLFELLYGKTPFKGPTNDDTLANVVSQSLKFPSTPIISFHARDLIKGLLIKDPENRLGFVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFHDFGSNVPFLATHKENTNGLEDIEDCEEFELF*	815

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan3g0730	814	ProSiteProfiles	Protein kinase domain profile.	429	763	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan3g0730	814	MobiDBLite	consensus disorder prediction	304	318	-	-
	Lan3g0730	814	PANTHER	SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1	1	813	-	-
	Lan3g0730	814	Gene3D	Transferase(Phosphotransferase) domain 1	657	781	-	-
	Lan3g0730	814	PANTHER	FLIPPASE KINASE 1-RELATED	1	813	-	-
	Lan3g0730	814	Gene3D	Phosphorylase Kinase; domain 1	427	508	-	-
	Lan3g0730	814	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	550	562	IPR008271	GO:0004672\|GO:0006468
	Lan3g0730	814	Pfam	Protein kinase domain	660	763	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan3g0730	814	Pfam	Protein kinase domain	430	579	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan3g0730	814	SUPERFAMILY	Protein kinase-like (PK-like)	404	781	IPR011009	-
	Lan3g0730	814	CDD	STKc_phototropin_like	427	786	-	-
	Lan3g0730	814	Gene3D	Transferase(Phosphotransferase) domain 1	509	578	-	-
	Lan3g0730	814	Coils	Coil	814	814	-	-
	Lan3g0730	814	SMART	serkin_6	429	763	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan3g0730	814	MobiDBLite	consensus disorder prediction	379	404	-	-
	Lan3g0730	814	MobiDBLite	consensus disorder prediction	379	399	-	-
	Lan3g0730	814	MobiDBLite	consensus disorder prediction	290	327	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan3g0730	Lan-Chr3	13449722	13459291	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan3g0730	364	814	AGC Kinase Gene Family	AT3G52890	64.935	0.0	620

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Lan3g0730		Pkinase	8.1e-37	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan3g0730	-		-	gmx:100784955	1215.68