Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0719 ATGGCGAAAATGAATTTGATTCCAGGGTTTCGGTTTCATCCCACTGATGTTGAGCTGGTTAAGTATTTTCTCAAGAGGAAGGTCTTAGGGAAGAAGTTCCCTTTCGATATTATTGCTGAAGTTGAGATTTACAAGTTTGCTCCTTGGGATCTCCCAGATAAGGCGTTGCTTAAAACTGGTGATTTGGAATGGTTCTTCTTTTGCCCTCGAGGGAAGAAATATGCAAGTGGAGCGCGGATGAATCGAGCAACAGAAGTTGGGTATTGGAAGACTACTGGGAAGGATAGATCGATTGAACATAGAAATGAAGTTGTGGGCATGATTAAGACCTTGATATTTCATACGGGTAGAGCACCTAAAGGAGACCGAACTGATTGGGTTATGCACGAATTCAGACTTGAAGATAAGGAGCTATCTGACAAAGGCATTCTCCAGGACTCCTATGTAATTTGTAAGGTGTTTCAAAAGGAAGGTCTTGGTCCCAGAAATGGTGCACAATATGGAAGACCATTTCAAGAAGAAGAATGGAATGAGGATGAGGAAATTGGTTGTGTAGAATCTCTCCCTGTTGCAGCTCTGTCTTCTGAAGGCCACCTTCAGTTTACTGCATGTCAAAGTTCTGTTGCAAAAGACATGCATCCTTCTACAAGTGAATGCATTGGGTTGACCTCTGTGTCATGTCTATCCGAATTGACGCCTTCTTGCTTGGCACTTCCTCCAGCTCCTCCAAGTAGTAGTAATCAAGCTGAAGATGACATTTTATTAATGCTCAATTCTTTCAAAGACGATGACACACTGGCTCTAAATGAGAGCAACAAAATTAAGGAGGTTGATAATACTGGCCAGGATAATATTGCTAATGGCACACCTTATTTTGATCCAAATGAGATATTTGAGGGTTTGGGAGACCTTGACAACTTGGGTAGATTGGGTGATGGACATGGTTTTTCTCGTGTCGACAAAGATGAATATAACACCAATGAAATGCTTTCTACAAGTGATATCTTGAGGTTTGGTGACCCTCCAGGATTCTTGGAGTTGATTGACTTAGAGGCGCCATTGTTCTGGCAGACTAAACATGATTGA 1086 0.418 MAKMNLIPGFRFHPTDVELVKYFLKRKVLGKKFPFDIIAEVEIYKFAPWDLPDKALLKTGDLEWFFFCPRGKKYASGARMNRATEVGYWKTTGKDRSIEHRNEVVGMIKTLIFHTGRAPKGDRTDWVMHEFRLEDKELSDKGILQDSYVICKVFQKEGLGPRNGAQYGRPFQEEEWNEDEEIGCVESLPVAALSSEGHLQFTACQSSVAKDMHPSTSECIGLTSVSCLSELTPSCLALPPAPPSSSNQAEDDILLMLNSFKDDDTLALNESNKIKEVDNTGQDNIANGTPYFDPNEIFEGLGDLDNLGRLGDGHGFSRVDKDEYNTNEMLSTSDILRFGDPPGFLELIDLEAPLFWQTKHD* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0719 361 PANTHER PLANT NAC DOMAIN PROTEIN 1 234 - -
Lan3g0719 361 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Lan3g0719 361 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 234 - -
Lan3g0719 361 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Lan3g0719 361 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Lan3g0719 361 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0719 Lan-Chr3 13150337 13154599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0719 1 240 NAC Transcription Factor Family AT5G64060 57.261 3.19e-96 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan3g0719 NAM 2.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0719 - - adu:107470479 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0719 3 13150337 13154599 Lan3g0719 3 13150337 13154599 ECH