Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0712 ATGGCTTTTGAGAATTGCAAATTTGATATCGGAGAGTTTCAAGACCTTGTTTTTGACAACATTGAAAGTGGTAGTTCTGATAATTTGAGTGAATTTGAGAGCCAACTTTGTGTCCCACAAGACCCAATTGAAGAATTAGAAAATTTCCCATATTTCCCTAATGATTTCATATCATTAAACGAAGTGGAATGGGTAATGCCAGAGCTAGAACAAAACAAGGAAAAAGAAGAGTTAAAAGCAAAGCAACAAAACAAAGAGGTTGTTGAATTTTTGGTCCATGGTTTTGTTGGGAAAAAAGCAAGGACAAAAAATTATCATAAGCCAAAATGTGAAGTGAAGTGGGTGAAGAAAAGGTGCAGTCATTGTGAAGCAGAAGTGACACCACAATGGAGGAATGGACCTATGGGACCAAAGACATTGTGCAATGCTTGTGGAGTTCGATACAAATCAGGTAGATTGGTTTCAGATTATCGTCCAGCAAATAGTCCCACATTTGATAGTTCTATACATTCTAATTATCATAGAAATATTATGAAGAGGAGAAGATGCTCCTAG 555 0.364 MAFENCKFDIGEFQDLVFDNIESGSSDNLSEFESQLCVPQDPIEELENFPYFPNDFISLNEVEWVMPELEQNKEKEELKAKQQNKEVVEFLVHGFVGKKARTKNYHKPKCEVKWVKKRCSHCEAEVTPQWRNGPMGPKTLCNACGVRYKSGRLVSDYRPANSPTFDSSIHSNYHRNIMKRRRCS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0712 184 PANTHER GATA TRANSCRIPTION FACTOR 24 183 - -
Lan3g0712 184 ProSiteProfiles GATA-type zinc finger domain profile. 117 149 IPR000679 GO:0006355|GO:0043565
Lan3g0712 184 Gene3D - 111 183 IPR013088 GO:0006355|GO:0008270
Lan3g0712 184 ProSitePatterns GATA-type zinc finger domain. 119 144 IPR000679 GO:0006355|GO:0043565
Lan3g0712 184 PANTHER GATA TRANSCRIPTION FACTOR 4-LIKE 24 183 - -
Lan3g0712 184 CDD ZnF_GATA 118 166 IPR000679 GO:0006355|GO:0043565
Lan3g0712 184 SMART GATA_3 113 167 IPR000679 GO:0006355|GO:0043565
Lan3g0712 184 Pfam GATA zinc finger 119 152 IPR000679 GO:0006355|GO:0043565
Lan3g0712 184 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 116 172 - -
Lan3g0712 184 Coils Coil 59 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0712 Lan-Chr3 12830784 12831338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0712 29 182 C2C2-Gata Transcription Factor Family AT3G60530 39.412 3.45e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan3g0712 GATA 2e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0712 - - lang:109342342 374.785