LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan3g0705	ATGTTGGGAGACATAACAACAGGACCTACCTATAGCTTCACGCACCGGCTACAATTACTTAGTAAACGTACTTCTTCTATGTATCATCGCTTTTCCATGCCTTCTAGCCCGACAAAATCCATTGAGGATGGAAGGAGTGATCAACTATCTGAGCAAACAGAAATTAGTTTATGGGAGAGGCTTGGTAGAGCAGAAATGTTGGACGTCGAATCGAGCTCATTTTCTTGGGACCGGCTCTCTTCATTATACCATACTGAACACAGTAGCAGCAATGACCATTCTGAGGATGAAATGAACAGAGCTCTTGAGGTAACTGTAAATTCTGGAGGGGTTGTCTTCTTTGCCTTTTTCAATGGTCTGGGTAATGATGATGGTTTTCCAAAAGAAGCAGCAGCTGTTATAAAGATATCATCATCAAGAATGGCAACACAGTCTGAACGCCTTGGGTATGAATTTGCCAAGTGGTTGGGAGTCCCAACTCCACAGGCTAGAGTCATTCACAACACCACTTTGGAATGGCTCCAAGTAAAGGAAGCAACAGAAAAAGCAAGAGATGCAACAAGTTCTAAGGGTGATGAAATTGGTGAAATGACATGCTTTGAACTTTTGGAAGCACTTGAGCTTAGCCGTTGTCTCCTTTTTATGAGTTATGTACATGGTTCACCTTTGCTTGAAAGCTCTTGTGCATTTGAATCACGGGAGTCAGCAGAAAGAACATCAGCAGCCCTTGGCAGGGTAATGATGTTGGACCTCGTTATCAGAAATGAAGATAGACTTCCTTGTCGTCAACTAAGATGGCGTGGGAACTATGCAAATTTGTTGCTGGCTGAAAATATGATCTCTGCAAATACAGACACGCTAGGAGAGGCTTTTGATTCTGCAATGAACCAATACAGGCCGAGGGTGACTAGGGCACTTCAAAATCAAAGGTCCACTTCTGATAGCAGATTGAGTTCTCATAATCCTGTGTTGGCATCAGCAGGCTCTGATCTTTCAGATATCAAAGAATCACCAGTATCTGCTGACATGAGCTTTAAAGGCCAAACATCAAGAGAACCATTGCGTACTGACTTTAACATTGTGGCAATTGATTCTGGTGTTCCTCGTCGACCCCCTGCTGGAAAACGTGCAAATGATCAGGTTAACTATCCCAAGTTGGTTGAGTTACTACTCAATAGTTCTGAATTTTCCTCTAACCTGTTACATGATATAACTGGAGGAAGATTAGGATTTCCCCCACCAGAAGATATAAATACAACAACTTATATACATGTAAGTCATGTAACATCAGTAGTTCATGAGTTCCGTAGTGGTTTTCGTGCTGCTCTTAGGGACCTGCAAGGATTCCATATATTCCTTCTCACGCTTCACCAAAAACTTGATAACCTGTTAAGGTTATTTATGAATATTATAAGCAAAATATCATTGGGGGAATCTGAAAAGGACGATTCACTGGTTCCTGACTCACCTTCTCTGGCTGCTATTGTCAGTTGTCCCTCACCAACAAGTAAGGAGAGGTTTTCTAATTATAACCATCAAGATTTTTGTGATTCAGAATCACAGAGAAGTGCTCCAAGGGCATCATCATCTTCAGGCATTAGAGATTGTTGTGACTCTGCTTCTTCTATGTCAAGAGAAAGTTGGCATGCAAAATCACTTCGTAGTCTCTGCTTGACAACTAAACTTCGTGACTTTCATAAATTTGCCAAGGTTGATGCAGAATCTAATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAATGATGCCATCAAGTTATGCCTGGAGAACAATTTCAACTCAGGATTTTTTGAGGGTAGTGATAACAACAGTGTTATTGATGCATATGAACTGAAGGTTAGACTTGAACATATCCTTGAAAGGATTGCATTGATATCTGAAGCTGCAAGTACAGAGAGACCATCCATTGTTACAAATACTCTGCTCATTGGTGGAGCACTGGCTGCAAGATCTGTATACACACTGCAACACTTAGGGATCACACATATTTTGTGTTTGTGTACTAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGATCTATTTGAATACAAAAATTTCTACGTGTGTGACAATGAAGATTCTAACATCAGCGACATATTTGAAGAAGCTTGTGATTTTATAGATTGTGTTGAGCAAACAGGTCAAAAGATTTTAGTTCATTGCTTTGAGGGGAGAAGCAGGAGTGTCACTTTGGTCCTTGCTTACTTAATGCTCAAGAAGAAGTTCACATTATTAGAAGCATGGAATGCTCTGAAGAGAGTTCATCGTCGGGCACAGCCCAATGATGGTTTCACAAAGATTTTACAGGAACTGGATCTCAAACTGCATGGAAAAGTTTCGATGGAGTGGCAGCAAAGGAAACCAACGATGAAAGTTTGTCCCGTCTGTGGTAAGAATGCTGGAATAAGCAGTGGTTCGCTTAAGCTCCATCTTCAGAAATCGCATAAAAAGCTATCATCAGGGAGTGTTGACAGTGCCATGACAATGGAGATTGAGAAGGCTTTGATAGCTTTGAAGATTAGCCGTGGTGGGAGTGTAAGCCCCACACAAAGGCAGTCTCATTCAATGATAGATGAATAG	2604	0.4098	MLGDITTGPTYSFTHRLQLLSKRTSSMYHRFSMPSSPTKSIEDGRSDQLSEQTEISLWERLGRAEMLDVESSSFSWDRLSSLYHTEHSSSNDHSEDEMNRALEVTVNSGGVVFFAFFNGLGNDDGFPKEAAAVIKISSSRMATQSERLGYEFAKWLGVPTPQARVIHNTTLEWLQVKEATEKARDATSSKGDEIGEMTCFELLEALELSRCLLFMSYVHGSPLLESSCAFESRESAERTSAALGRVMMLDLVIRNEDRLPCRQLRWRGNYANLLLAENMISANTDTLGEAFDSAMNQYRPRVTRALQNQRSTSDSRLSSHNPVLASAGSDLSDIKESPVSADMSFKGQTSREPLRTDFNIVAIDSGVPRRPPAGKRANDQVNYPKLVELLLNSSEFSSNLLHDITGGRLGFPPPEDINTTTYIHVSHVTSVVHEFRSGFRAALRDLQGFHIFLLTLHQKLDNLLRLFMNIISKISLGESEKDDSLVPDSPSLAAIVSCPSPTSKERFSNYNHQDFCDSESQRSAPRASSSSGIRDCCDSASSMSRESWHAKSLRSLCLTTKLRDFHKFAKVDAESNKELEQWNEMLKNDAIKLCLENNFNSGFFEGSDNNSVIDAYELKVRLEHILERIALISEAASTERPSIVTNTLLIGGALAARSVYTLQHLGITHILCLCTNEIGQSDSQFPDLFEYKNFYVCDNEDSNISDIFEEACDFIDCVEQTGQKILVHCFEGRSRSVTLVLAYLMLKKKFTLLEAWNALKRVHRRAQPNDGFTKILQELDLKLHGKVSMEWQQRKPTMKVCPVCGKNAGISSGSLKLHLQKSHKKLSSGSVDSAMTMEIEKALIALKISRGGSVSPTQRQSHSMIDE*	868

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan3g0705	867	Gene3D	-	223	336	IPR036940	GO:0016301
	Lan3g0705	867	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	640	785	IPR029021	-
	Lan3g0705	867	CDD	DSP	641	778	-	-
	Lan3g0705	867	PANTHER	DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN	1	867	-	-
	Lan3g0705	867	MobiDBLite	consensus disorder prediction	306	335	-	-
	Lan3g0705	867	Gene3D	Protein tyrosine phosphatase superfamily	623	795	IPR029021	-
	Lan3g0705	867	Pfam	Actin-fragmin kinase, catalytic	54	335	IPR015275	-
	Lan3g0705	867	Pfam	Dual specificity phosphatase, catalytic domain	661	778	IPR000340	GO:0008138\|GO:0016311
	Lan3g0705	867	MobiDBLite	consensus disorder prediction	306	326	-	-
	Lan3g0705	867	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	640	785	IPR020422	GO:0006470\|GO:0008138
	Lan3g0705	867	SMART	dsp_5	640	782	IPR020422	GO:0006470\|GO:0008138
	Lan3g0705	867	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	705	761	IPR000387	GO:0016311\|GO:0016791
	Lan3g0705	867	SUPERFAMILY	Protein kinase-like (PK-like)	36	380	IPR011009	-
	Lan3g0705	867	PANTHER	DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1	1	867	IPR035010	GO:0004721\|GO:0009737\|GO:0043622

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan3g0705	Lan-Chr3	12513273	12520671	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan3g0705	1	851	Protein tyrosine phosphatase (PTP) family	AT5G23720	62.900	0.0	1048

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan3g0705	K14165		-	gmx:102661225	1275.38