Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0700 ATGAAAGATTCATCATCACCTAACGCAGACCCTATCACACTTTCCCTCAATCTCCTTTCATCCCTCCTTGATCAAGAAATCCCCACCGTCCATCACTTTAAAAGCAAGTGGTCCCTCGCCCGAGTTAAACTCACTCTTCTCCAAACTCAACTCACCGATTTCTCCGCCGAGTTTCCTAACTCCTCTCACCCTCTCTCCATTGATCTCATTAACTCAATCTCCCACACCCTACACGACGCCGTTTTACTCGTACATCATTCTCAGTTCCCCACCCTTCAAAACGGCAAGCTCAAAACGCAAAACGATATCGACTCTCTCCTCTCCAAACTCCATCGCCACGTCACCGACTGCGATATTCTCATACGTAGCGGCGTTCTCAGTGAAAACCGAAACGGCGACTTTTCAACTTCGAAACGCGAAACTGTTAGATTAGAATGTCGAAACCTTATAACTCGGTTGCAAATCGGGTCGAACGAGTCGAGGAACTCAGCGATGGACTCGTTACTCACTGTTCTCAACGAAGACGATAAGAACGTAACAATAGCGGTAGCGCAGGGTATCGTTCCCGTGCTCGTTCGCTTACTTGATTATTCCCCGTCAACTTCAGAAATGAAGGAGAAAATCGTTACTGCGATTTCTAGGGTTTCAACCGTTGATTCAGGGAAGCATGTTTTGGTCGCGGAGGGTTTGTTGCTTCTGAATCATCTTCTTCGGGTTCTTGATTCTGGTACCGGATTTGGTATCGAAAAAGCTTGCATTGCGCTTCAGGCACTGAGTTTCTCGAAGGAGAACGCGAGAGCGATCGGGTCGAGAGGTGGAATCTCGTCTCTGTTGGAGATTTGCCAGGCTGGCACTCCCGGTTCGCAAGCCTCAGCTGTTGGAGTTCTCAGGAATATTGCCGCATTCCCCGAAATTCAGGAGAATCTGGTTGAGGAGAATGGTGTTGTTATTCTGTTAGGACTTGCTGCCTCTGGTACTCCTTTAGCGCAAGAAAATGCTATTAGTTGTTTGTCTTGTTTGATTTCAGATGCAGAGAGATTGCGGATTTTGGTTGTTAAACAAGGTGGGATTGAGATTTTGAAGAATTTTTGGGACTCTGCTTGTTTAACAAACAAGGGTCTTGAAGTTGCGGTCGAGATTTTTAGAAACTTGGCTTTGAGTGGACCTATAGCTGAGGTTCTTATTTCCAAAGGGTTTGTGGCGAGGTTGGTTGGTGTGCTTAATTGTGGAGTGTTGGCGGTGAGAATTGCTGCGGGGAAAGCCGTGTATGCTTTGGGCTTGAGTGGCGGCACAAAGGCTAAGAAGGAAATGGGGGAGTGTGGCTGTATTGTGCCTTTGATTAAAATGTTGGATGGGAAAGCTCTTGAAGAGAAAGAAGTGGCGATAATGGCTTTGTCTGTGCTCTTGTTGCATGCAGAGAATCGGAGGGTTTTCCGGAAGGACGAGAAGGGTGTAGTAAGTGTAGTGCAGTTACTGAATCCTTCATTGCAGGGTTTGGATAAGAAGTACCCTGTTTCATTGCTGGCATTGCTGGTGCATTCCAAGAGTTGTAGGAAGCAAATGGTGGCAGCTGGGGCTTGTGTGTTTACACAGAAGCTTGTTGAGATGGATGTCGAAGGATCTAAGAAATTGTTGGAGAGCCTTCACCATGGTAAGATATGGCGAGTTTTTTCAAGACCCTAG 1683 0.467 MKDSSSPNADPITLSLNLLSSLLDQEIPTVHHFKSKWSLARVKLTLLQTQLTDFSAEFPNSSHPLSIDLINSISHTLHDAVLLVHHSQFPTLQNGKLKTQNDIDSLLSKLHRHVTDCDILIRSGVLSENRNGDFSTSKRETVRLECRNLITRLQIGSNESRNSAMDSLLTVLNEDDKNVTIAVAQGIVPVLVRLLDYSPSTSEMKEKIVTAISRVSTVDSGKHVLVAEGLLLLNHLLRVLDSGTGFGIEKACIALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQASAVGVLRNIAAFPEIQENLVEENGVVILLGLAASGTPLAQENAISCLSCLISDAERLRILVVKQGGIEILKNFWDSACLTNKGLEVAVEIFRNLALSGPIAEVLISKGFVARLVGVLNCGVLAVRIAAGKAVYALGLSGGTKAKKEMGECGCIVPLIKMLDGKALEEKEVAIMALSVLLLHAENRRVFRKDEKGVVSVVQLLNPSLQGLDKKYPVSLLALLVHSKSCRKQMVAAGACVFTQKLVEMDVEGSKKLLESLHHGKIWRVFSRP* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0700 560 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 9 558 - -
Lan3g0700 560 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 186 230 IPR000225 GO:0005515
Lan3g0700 560 SUPERFAMILY ARM repeat 145 522 IPR016024 -
Lan3g0700 560 Gene3D - 136 366 IPR011989 -
Lan3g0700 560 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 558 - -
Lan3g0700 560 SMART arm_5 302 342 IPR000225 GO:0005515
Lan3g0700 560 SMART arm_5 430 470 IPR000225 GO:0005515
Lan3g0700 560 SMART arm_5 343 386 IPR000225 GO:0005515
Lan3g0700 560 SMART arm_5 175 217 IPR000225 GO:0005515
Lan3g0700 560 SMART arm_5 261 301 IPR000225 GO:0005515
Lan3g0700 560 Gene3D - 367 548 IPR011989 -
Lan3g0700 560 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 272 314 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0700 Lan-Chr3 12201090 12203210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0700 142 360 U-box Gene Family AT2G23140 24.324 5.19e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0700 - - gmx:100807228 720.309