Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0699 ATGGGTTGCGTGCTCGGAAAGCATGCCGGTGACGGGGCTCAGCACCGTCACTGGAGTACCAGCCAGAGAAACGTTGTTTCTGATAATAATGCCGTTATGGTTCGTGAGAGGCAAGGGAATCGGCACACCGGCGATTTCCTGGAGAATGTTCCGGTACCGGAACGCCGGCAACATAGACTCGATCCGTGCACGGTGAACCAAAAAGGTTGGCCGTCGTGGTTGATGGCCGTCGCCGGTGATGCCATCGGCGATTGGACTCCTCGCCGCGCCAACACCTTCGAGAAGCTTGCTAAGATTGGACAAGGAACTTATAGCAATGTTTATAAGGCAAGGGACCTTGTTACTGGGAAGATTGTGGCTTTGAAAAAAGTGAGATTTGATAATTTGGAACCAGAGAGTGTGAAGTTCATGGCAAGAGAGATAATTGTTTTAAAGAAGCTTGATCACCCAAATGTTATAAAGCTTGAAGGGTTGGTTACTTCTAGAATGTCATGTAGTCTTTACTTGGTCTTTGAATATATGGAACATGATCTTGCAGGCCTTTCAGCTGGTCAAGGTGTTAAGTTCACTGAACCTCAGGTCAAATGCTTTATGAAGCAGTTACTCTCTGGCCTTGAGCATTGCCACAGTCGAGGTGTATTGCACAGAGATATCAAGGGTTCCAACCTGCTTATTGACAATGAGGGGATCCTTAAAATTGCAGATTTTGGACTGAGTACTTTCTTTGATCCAATGCAAAAGCAGTCCATGACAAGCAGAGTAGTGACCCTCTGGTATCGTTCCCCTGAGCTTCTTCTTGGAGCTACATTTTATGGTGTCGGTATTGACCTTTGGAGCGCTGGTTGCATCTTGGCTGAGCTGCTTTATGGGAAGCCAATTATGCCTGGCCGGACAGAGGTTGAACAACTGCACAAAATATTTAAGCTCTGTGGCTCTCCATCTGAGGAATATTGGAAGAAGTATAAATTACCAAATGCCACAATCTTTAAGCCACAGCAGCCATATAAACGTTGCATCTCCGAAACATTCAAGAATGTTCCTCCATCTTCACTACCGCTAATTGAAAGTCTTCTTGCGACCGATCCTGATGATCGTGGCACTGCCTCAGCTGCTCTAAATAGTGAATTCTTTACCACTGAACCCTACGCTTGTGAATCATCGACTTTACCAAAGTATCCTCCCAGCAAAGAATTGGATGTAAAACTGAGGGATCAAGAAACAAGAAGGCAAAAAGCTATGACTGGAAAAGCTCATGCAGTTGATAGTGCGAAAAGAGTAAGAACACGTGAGCATGGTCGGGCCATTCCAGCCCCCGAAGCCAATGCAGAGATCCAAACAAACTTAGATAGGTGGAGAGTTGTGAACCATGCAAATGCAAAAAGCAAGAGTGAGAAATTTCCTCCTCCTCATCAAGATGGAGTTGTTGGATATCCACAAGATGAATCACATAAAGGACCTGTTTCATTTGGTGCCACTGACACTTCCTTTGGCTCAGGGATATTCAATTCCAAACCATCTGAACCTGTCAGAAAATATGGTGCTGAAGGACCTTACAGAGGGAGGAAAACTAAAATTCAAGGCTCACGGATGACCTCATCATGGAAATTTATGCGCACATTCAAACCATCAACAATTGGTATTTCAATGAATTTACTGTTTAAGAGCAAATAA 1671 0.447 MGCVLGKHAGDGAQHRHWSTSQRNVVSDNNAVMVRERQGNRHTGDFLENVPVPERRQHRLDPCTVNQKGWPSWLMAVAGDAIGDWTPRRANTFEKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLEPESVKFMAREIIVLKKLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLSAGQGVKFTEPQVKCFMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLSTFFDPMQKQSMTSRVVTLWYRSPELLLGATFYGVGIDLWSAGCILAELLYGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYKLPNATIFKPQQPYKRCISETFKNVPPSSLPLIESLLATDPDDRGTASAALNSEFFTTEPYACESSTLPKYPPSKELDVKLRDQETRRQKAMTGKAHAVDSAKRVRTREHGRAIPAPEANAEIQTNLDRWRVVNHANAKSKSEKFPPPHQDGVVGYPQDESHKGPVSFGATDTSFGSGIFNSKPSEPVRKYGAEGPYRGRKTKIQGSRMTSSWKFMRTFKPSTIGISMNLLFKSK* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0699 556 Gene3D Phosphorylase Kinase; domain 1 80 175 - -
Lan3g0699 556 PANTHER CELL DIVISION PROTEIN KINASE 66 530 - -
Lan3g0699 556 MobiDBLite consensus disorder prediction 1 20 - -
Lan3g0699 556 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 66 530 - -
Lan3g0699 556 Gene3D Transferase(Phosphotransferase) domain 1 176 417 - -
Lan3g0699 556 SMART serkin_6 93 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0699 556 Pfam Protein kinase domain 93 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0699 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Lan3g0699 556 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Lan3g0699 556 ProSiteProfiles Protein kinase domain profile. 93 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0699 556 CDD STKc_CDK9_like 93 377 - -
Lan3g0699 556 SUPERFAMILY Protein kinase-like (PK-like) 87 382 IPR011009 -
Lan3g0699 556 MobiDBLite consensus disorder prediction 498 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0699 Lan-Chr3 12173419 12178051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0699 85 432 Core Cell Cycle Gene Families AT5G10270 48.774 2.18e-113 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lan3g0699 Pkinase 1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0699 K08819 - gmx:100807756 943.725