Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0696 ATGAGTGCTCCCATGGAAATCTTTCTACAAAACCCTTCCACCGACGAAACCTCCGACCAAAACGGCGTCGTCATTTCCCAACACCCACCTCCTTCTCCTTTACCTTCTCTTATCCTTCCACAAGAGAAATTTCTTGTCCCTGTCGAGGTATGCTTAAAATCTTCCAGCACAGCTCGGATTGATGATGTCCGTTCTGCGGTTGAGAGGATGCTTGAAAAGAGGAGTTTGAGCTATAATGATGGACCCATTCCTGTTCCTCCTGATGAAACGTTTCTTGCAGATAACGTTCAAAGAATCTGTGTTTGTGATACAGATGAGGGGATGCACAATGATAATGTTCTTTTGTTCTGGCAAGTGAAGCCTGTTGTGCATGTCTTTCAGCTAAGTGAGGAAGGACCATCTGAGGAAATAAGTTCTGATGGCCAGACTTCCACTTTCAATGAATGGACTCTTCCTGCAAAAGAATTTGATGGCATGTGGGAAAGCTTAATGTATGAATCTGGTCTAAAGCAAAGGTTGTTACGTTATGCAGCAAGTGCTTTGCTCTTTACTGAAAAGTGTGTTGATCCATTCCTTGTTTCATGGAATCGCATAATTCTTTTACATGGACCTCCTGGGACTGGAAAGACATCTTTATGTAAAGCATTAGCTCAGAAACTATCAATTCGGTTCAATTCAAGGTACCCACTGTGCCAGCTGGTTGAAGTGAACGCACATTCTTTGTTCAGTAAATGGTTTTCTGAAAGTGGCAAGCTGGTTGCAAAACTTTTCCAAAAAATTCAAGAGATGGTGGAGGAAGAAAGCAATCTGGTATTTGTTTTGATTGATGAAGTTGAAAGCCTTGCAGCTGCTAGAAAAGCTGCTCTATCTGGTTCTGAACCTTCAGACTCTATTCGGGTTGTCAATGCATTACTCACTCAGATGGATAAGTTAAAATCATCTCCAAATGTGATAATACTAACCACCTCCAACATAACTGCTGCTATCGATATTGCTTTTGTTGATCGAGCTGATATCAAAGCATATGTTGGTCCCCCGACTCTTCATGCTCGGTATGAAATATTAAGGTCTTGCTTGCAAGAACTGATGCGTACAGGGATCTTAAGTAGTTTGCAGGGTTGTACGGATGTGACACTTCCAAATTATGCTAGAGCAAAGGAGTGGTTAAATGCACCGGATTCACATGAGCCTGTGCTACTCTGCAAGAAACTACTTGAAGCTGCAGAGTCATGTGAGGGAATGAGCGGAAGAACTTTGAGAAAGCTTCCATTTTTGGCACATGCTAACCTTACCAATCATCTTGATTGCGACCCCATTAAGTTCTTGTCTACAATGATAGAAACAGCAAAGAGGGAGCGTTCTGAGCTTCCTGACTAA 1377 0.4227 MSAPMEIFLQNPSTDETSDQNGVVISQHPPPSPLPSLILPQEKFLVPVEVCLKSSSTARIDDVRSAVERMLEKRSLSYNDGPIPVPPDETFLADNVQRICVCDTDEGMHNDNVLLFWQVKPVVHVFQLSEEGPSEEISSDGQTSTFNEWTLPAKEFDGMWESLMYESGLKQRLLRYAASALLFTEKCVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRYPLCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLHARYEILRSCLQELMRTGILSSLQGCTDVTLPNYARAKEWLNAPDSHEPVLLCKKLLEAAESCEGMSGRTLRKLPFLAHANLTNHLDCDPIKFLSTMIETAKRERSELPD* 459
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0696 458 Gene3D - 136 363 IPR027417 -
Lan3g0696 458 CDD AAA 197 345 - -
Lan3g0696 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 427 IPR027417 -
Lan3g0696 458 ProSitePatterns AAA-protein family signature. 317 336 IPR003960 GO:0005524|GO:0016887
Lan3g0696 458 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 39 455 IPR044539 -
Lan3g0696 458 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 199 217 IPR001270 GO:0005524
Lan3g0696 458 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 313 327 IPR001270 GO:0005524
Lan3g0696 458 SMART AAA_5 195 347 IPR003593 -
Lan3g0696 458 Pfam ATPase family associated with various cellular activities (AAA) 199 344 IPR003959 GO:0005524|GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan3g0696 Lan-Chr3 12028094 12034765 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0696 199 372 Calmodulin-binding Proteins AT3G56690 30.114 2.64e-13 70.5