Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0686 ATGGAAGATAAGCTTTCTTTTGAGGTGCCTTTATCTAAAGGAAATTTTTTGCAAGATTTTAACCATATTGATCAATTTCATGTGAATGTTTCCTCATCAAACAATCCATTTTTTGGGGTCCAAACTCAAAACTTTGACCCTTATAATCATAATTTTACATACGGATATTCATCAACTGGCTTTGATGTTTATGAGTGCAAGCCTTTTGTGGAGAATAATATTGGTGGGCATGCTCATGTTATTAACAACTTCCAATTTGATGGTTATAGTTTGAACCTCCTTCAGAGAAACCAAATGGGTTCCATGGTTTCAAACAGAAATTATTTGCACTTCAATAATCCTTTAGAAACAAAGCCTATGAATTTTCTTGCACCAGATGAAGCCCCATGCATATCACCATTGAGTTATAACAAAGAAGTTGGTGTGAATAAAATCAATAATATTAGGGCATATTCAACCACTACTAGGTCATGCAAAGCTAAGAGGAAGTCCAACATAGTAAAGGGACAATGGTCAGCAGATGAAGATAGATTGTTAGATTCAATTGGTGGAACAATATGGAGTGAGAAAGTGGTATCTTATTGCTCAGATGCTGCCTGGAAGAATTGGCAAACAATGCAGAGAGAGAAGGACACATGGACTAATGAGGAGGATAAGATACTAATCCAAGCTCACAAAGAGATGGGAAATAAGTGGGCAGAGATTGCTAAAAAATTACCAGGAAGAACTGAAAACTCCATCAAAAACCATTGGAATGCAACAAAGAGAAGGCAATATTCAGACCAAAGAAATTCTCGTTCAAAGCACCCTAAAGACACTCTTCTGCATGAATATATCAAGAGCTTGAACTTAGACAAAAATCCACCCATAGACTACAGGAAAAGATCTTATGCTAATGCTAGAGCAATGAAAAACAACCCTAGCACAAACAAAGTAGCAGCAACATCACTAGTTCAGTTACATAATATTGATGATCAATCTTCTCTAAGTGATTGTATGGTACCAAATCTTGATTTTTGCTTTGATGAGCATATATTCAAAGATGGATATAGTATTGATTCTCTTCTAGATGATATTCCTTGTGGTCCTCCTACTATGAATGAAAAATATTTTGATGAAAGAATGCAAGGTGTTACTCCTCATAATGTTGAAGGAAAACATTTTGATATTGGAGGAATGCAATGTGACAATCCTGTTCCTGTTGATGGCAATCCTTTTGAGACAGAAATGGCAAAGGAGATTATGGAACCTACTCTTGGAGTTGATGTTAAGAAGAAGGTAGATTGGGTGGAGATGTTGTCTCTGCTCAAGTGA 1314 0.3607 MEDKLSFEVPLSKGNFLQDFNHIDQFHVNVSSSNNPFFGVQTQNFDPYNHNFTYGYSSTGFDVYECKPFVENNIGGHAHVINNFQFDGYSLNLLQRNQMGSMVSNRNYLHFNNPLETKPMNFLAPDEAPCISPLSYNKEVGVNKINNIRAYSTTTRSCKAKRKSNIVKGQWSADEDRLLDSIGGTIWSEKVVSYCSDAAWKNWQTMQREKDTWTNEEDKILIQAHKEMGNKWAEIAKKLPGRTENSIKNHWNATKRRQYSDQRNSRSKHPKDTLLHEYIKSLNLDKNPPIDYRKRSYANARAMKNNPSTNKVAATSLVQLHNIDDQSSLSDCMVPNLDFCFDEHIFKDGYSIDSLLDDIPCGPPTMNEKYFDERMQGVTPHNVEGKHFDIGGMQCDNPVPVDGNPFETEMAKEIMEPTLGVDVKKKVDWVEMLSLLK* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0686 437 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 210 259 IPR017930 -
Lan3g0686 437 PANTHER BNAC07G50190D PROTEIN 92 286 - -
Lan3g0686 437 SMART sant 209 257 IPR001005 -
Lan3g0686 437 CDD SANT 212 255 IPR001005 -
Lan3g0686 437 SUPERFAMILY Homeodomain-like 200 262 IPR009057 -
Lan3g0686 437 PANTHER MYB PROTEIN-RELATED 92 286 - -
Lan3g0686 437 Pfam Myb-like DNA-binding domain 211 252 IPR001005 -
Lan3g0686 437 Gene3D - 211 263 - -
Lan3g0686 437 ProSiteProfiles Myb-like domain profile. 205 255 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0686 Lan-Chr3 11737952 11739694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0686 36 360 MYB Transcription Factor Family AT4G18770 37.534 1.47e-51 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan3g0686 Myb_DNA-binding 1.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0686 K09422 - gmx:100816653 437.958