Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0680 ATGGCAGCACGCAGATTCTCTTGGTTGCTCTCTCACTCTCTATCTGCTTCCCCTTCTTCTAAAGCTGCTTGTAATCTTCACTCACTAGATACAGTGAGAAACTCTGGAAAGTGGGGAAATATTGGAAGATTTAGCACTGCAGCAACTATTGAGGAATTAATCAATCCACAAGTTCAAATAAGTTACACAAAGCATCTGATAAATGGGCAATTTGTAGATGCTGCATCGGGTAAAACTTTTCCAACATATGATCCGCGCACAGGAGATGCGATTGCGCACGTTGCTGAAGGTGATGAAGAAGATATCGACCGTGCAGTATCATCTGCTCGCAAGGCTTTCGATGAAGGGCCTTGGCCGAAAATGACAGCTTATGAAAGATGTAAGGTACTATTGCGCTTTGCCGATTTGGCTGAGAAGCACAGTGATGAGCTAGCAGCTCTGGAGACCTGGAACAATGGAAAGCCTTATGAACAGTCTGCCAATGTTGAACTGCCATTGTTCGTACGCTTGTTTTACTACTACGCAGGTTGGGCAGATAAAATTCATGGTCTAACAGTACCTGCTGATGGAAATTATCATGTGGAGACATTGCATGAACCAATTGGAGTTGCAGGACAAATCATACCTTGGAACTTTCCTCTCATCCTGCTTGCTTATAAAGTTGGACCGGCTCTAGCCTGTGGTAATACCATCGTCCTCAAGAGTGCTGAGCAAACACCGCTAACGGCTCTCTATGTCGGAAAACTATTTCAAGAGCTAGCATTCACTGGATCAACTGATACCGGAAAAGTTGTACTCGAGTTGGCTGCAAGAAGCAACCTGAAGCCCGTGACATTGGAACTTGGAGGCAAATCACCTTTCATAGTATGTGAGGATGCTGATGTTGACCAGGCTGTAGAACTTGCACACTTTGCTCTGTTCTTTAATCAGGGGCAATGTTGTTGTGCTGGATCTCGTACCTTTGTTCATGAGCGTATCTATGATGAGTTCTTGGAGAAATCAAAGGCACGTGCTTTGAGACGTGTTGTTGGTGATCCTTTCAAAAAGGGTGTTGAACAAGGTCCTCAGATTGACAAGGAACAATTTGAGAAAATATTTAGGTACATAAGGTCTGGTATTGAAAGCAACGCTACCCTTGAATGTGGGGGTCAAAGAATTGGTTCAAAGGGCTTCTTTATTCAGCCAACTATCTTCTCAAATGTTCAGGATGACATGTTGATAGCAAAAGATGAAATATTTGGCCCAGTTCAAAACATCTTTAAGTTCAAGGATATTGATGAAGTAATTGGAAGGGCAAATGCAACACGTTATGGTCTAGCTGCAGGTGTCTTCACTAAGAACGTGGACACAGCCAACACTTTGATGAGGGCATTAAGGGTTGGAACTGTTTGGATGAATTGTTTTAACGTTTATGATGCTGCAATTCCTTTTGGTGGGTATAAGATGAGTGGCACAGGTAGGGAGAAGGGTATATACAGTCTTAATAACTACCTGCAGGTGAAAGCTGTGGTTTCACCATTAAAGAATCCTGCATGGATTTAA 1542 0.43 MAARRFSWLLSHSLSASPSSKAACNLHSLDTVRNSGKWGNIGRFSTAATIEELINPQVQISYTKHLINGQFVDAASGKTFPTYDPRTGDAIAHVAEGDEEDIDRAVSSARKAFDEGPWPKMTAYERCKVLLRFADLAEKHSDELAALETWNNGKPYEQSANVELPLFVRLFYYYAGWADKIHGLTVPADGNYHVETLHEPIGVAGQIIPWNFPLILLAYKVGPALACGNTIVLKSAEQTPLTALYVGKLFQELAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERIYDEFLEKSKARALRRVVGDPFKKGVEQGPQIDKEQFEKIFRYIRSGIESNATLECGGQRIGSKGFFIQPTIFSNVQDDMLIAKDEIFGPVQNIFKFKDIDEVIGRANATRYGLAAGVFTKNVDTANTLMRALRVGTVWMNCFNVYDAAIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAWI* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0680 513 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 279 286 IPR029510 GO:0016491
Lan3g0680 513 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 54 252 IPR016162 GO:0016491
Lan3g0680 513 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 253 503 IPR016162 GO:0016491
Lan3g0680 513 Pfam Aldehyde dehydrogenase family 252 503 IPR015590 GO:0016491
Lan3g0680 513 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 31 252 - -
Lan3g0680 513 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 252 513 - -
Lan3g0680 513 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 307 318 IPR016160 GO:0016491
Lan3g0680 513 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 285 474 IPR016163 GO:0016620
Lan3g0680 513 SUPERFAMILY ALDH-like 57 506 IPR016161 GO:0016491
Lan3g0680 513 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 31 252 - -
Lan3g0680 513 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 252 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0680 Lan-Chr3 11415450 11424381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0680 1 513 Aldehyde Dehydrogenase Gene Family AT3G48000 72.610 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0680 K00128 - tcc:18603880 847.425