Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0675 ATGGATTCTCTGAAAATATGCCAAGGTTATGGCAAAGTAGAAGATAATCACAACCTCGAAGATCAACAACAAAGTCATCATCAACCTCCACACCCTAAATTCTCCAAACCCATAATCATCACCATCTCCGTCTTCACCATCCTCTTCCTCACTTTCACCATCTCTCTCACTCTCGCCGCCCTGATCTACCACACCAACACCGAGTCACCAGATCAACCCTCCAACTCAGCCACCACAATCAAATCCGTTTGCAACGTGACTCGTTACCCAAAATCATGCTTCTCTTCAATCATCTCTTCTTCTTCCTTCTCCCAAAACCCCACCACCGACCCACAAGCGATTCTGAAAATCTCTCTCCATGTTGCTTTCGAAGAACTCAGTGCTCTTGCTTCTTCGCTCGTACCCATGGGCAATGGTCATGGACCCGCGGTGGCGGATTGTAAGGAGCAGATTGATGATGCGCTGAGTCGACTCAATGACTCGGTCTCTTTGATGTCGTCGGGCGGAGATGTTTTGACGGATGGGGAGATTGGGGACATACAGACGTGGGTGAGTGCAGCCGTGACGGATCAGCAGACGTGTCTTGATGGATTGGAGGAGATGGGGTCAGTGGACGCTGGGGAAGTCAAGGAGAAGATGCTGAGGTCATCTGAGTACTTGAGCAACAGTTTGGCTATTGTTGCTCATTTACAAGTCTTGTTAAAGCAATCCCATGTCCCACTCCATTGA 729 0.4883 MDSLKICQGYGKVEDNHNLEDQQQSHHQPPHPKFSKPIIITISVFTILFLTFTISLTLAALIYHTNTESPDQPSNSATTIKSVCNVTRYPKSCFSSIISSSSFSQNPTTDPQAILKISLHVAFEELSALASSLVPMGNGHGPAVADCKEQIDDALSRLNDSVSLMSSGGDVLTDGEIGDIQTWVSAAVTDQQTCLDGLEEMGSVDAGEVKEKMLRSSEYLSNSLAIVAHLQVLLKQSHVPLH* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0675 242 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 79 230 IPR035513 -
Lan3g0675 242 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 231 IPR035513 -
Lan3g0675 242 CDD PMEI-like_3 82 230 - -
Lan3g0675 242 Pfam Plant invertase/pectin methylesterase inhibitor 79 226 IPR006501 GO:0004857
Lan3g0675 242 PANTHER PECTINESTERASE 1-LIKE 3 237 - -
Lan3g0675 242 SMART PMEI_2 75 226 IPR006501 GO:0004857
Lan3g0675 242 PANTHER PECTINESTERASE 3 237 - -
Lan3g0675 242 TIGRFAM PME_inhib: pectinesterase inhibitor domain 46 230 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0675 Lan-Chr3 11207485 11208295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0675 1 242 Carbohydrate Esterase AT1G53840 31.538 1.08e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0675 - - zju:107419300 211.46