Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0670 ATGGCCACCGTTACAACGCAAGCTTCTGCTGCCATTTTCAGGCCATGTGCTTGTAAATCGAGGTTCCTTAGTGGCTCTTCTGGTAAAGTGAACAGGGAAGTAGATTTTAGGCCAATGAGGTGTCCTTCTACCTCTTTCAAGGTTCAAGCCAAGAAAGGAGAGTGGTTACCAGGGTTGGCCTCCCCAGGTTACCTCAATGGCAGTCTTCCTGGTGACAATGGGTTTGATCCTCTGGGTCTTGCTGAGGACCCTGAGAACTTGAGGTGGTTTGTTCAAGCTGAGCTTGTCAATGGACGATGGGCTATGTTAGGTGTTGCAGGGATGTTGCTTCCAGAGGTCTTCACCAACATTGGAATCATCAATGCTCCTAAGTGGTATGATGCAGGGAAAGAAGAATACTTTGCATCATCCTCAACCCTCTTTGTGATTGAGTTCATTTTATTCCATTACGTTGAAATCAGAAGATGGCAGGACATTAAAAACCCTGGAAGTGTCAACCAAGATCCCATCTTTAAGCAATACAGCTTGCCCGCAAATGAAGTTGGTTACCCTGGTGGCGTTTTCAACCCCTTGAACTTTGCACCAACTGTGGAGGCCAAAGAGAAGGAAATTGCTAATGGGAGATTGGCAATGTTAGCATTCTTAGGATTTATAATTCAGCACAACGTGACAGGCAAAGGACCATTTGACAACCTATTGCAGCACCTCTCCAGCCCATGGCACAACACCATTGTTCAAACACTGGGTGGCAACTAA 756 0.4616 MATVTTQASAAIFRPCACKSRFLSGSSGKVNREVDFRPMRCPSTSFKVQAKKGEWLPGLASPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIINAPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPANEVGYPGGVFNPLNFAPTVEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHLSSPWHNTIVQTLGGN* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0670 251 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 251 IPR001344 GO:0009765|GO:0016020
Lan3g0670 251 Pfam Chlorophyll A-B binding protein 62 221 IPR022796 -
Lan3g0670 251 Gene3D Chlorophyll a/b binding protein domain 62 241 - -
Lan3g0670 251 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 251 - -
Lan3g0670 251 SUPERFAMILY Chlorophyll a-b binding protein 51 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0670 Lan-Chr3 10924208 10926401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0670 55 244 Chloroplast and Mitochondria Gene Families AT3G61470 56.122 4.06e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0670 K08910 - rcu:8263414 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0424 15 9442574 9444088 Lan3g0670 3 10924208 10926401 LSH