Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0656 ATGGTTTCCCCGGAAAATTCTAACTGGTTTCTCGATTATGGCTTGATCGATGATATCCCTGTTCCTGATCCCACCTTCAATTGGCCCCCAAATCCTTCTTCCAATGTCGGTGTTGAGCTTGAACTTGATGTCTCACTTGGCGATTCTGATGGTCTGAAAGAGCCTGGTTCGAAGAAGAGGGGTAGATCTGATTCATGTGCTGGTTCTAGCTCTAAGGCTTGTCGGGAGAAGTTGCGGAGGGATAGGCTTAATGACAAGTTTGTTGAATTAGGCTCCATCTTGGAGCCTGAAAGGCCTCCCAAAACAGACAAGTCTGCTATTCTGATTGATGCTGTCCGAATGGTGACACAGTTGCGGGGTGAAGCCCAGAAGTTGAAAGACTCCAATACAAGTCTTCAAGAGAAGATTAAAGAGTTAAAGGCTGAGAAAAATGAACTTCGTGATGAGAAACAGAGCCTCAAGGCAGAGAAAGAGAAGTTGGAGCAGCGGGTGAAGTCTATGAATCCACAACCTGGTTTCATGCATCATCCACCTCCTGGAATTCCTGCTGCATTTACTCCACAAGGCCAAGCCCCCAGCAACAAGTTGGTGCCATTTATGGGTTATCCAGGAGTTGCCATGTGGCAGTTCTTGCCACCAGCTGCCGTGGATACTTCACAGGATCATGTCCTCCGCCCTCCAGTTGCCTAA 690 0.4783 MVSPENSNWFLDYGLIDDIPVPDPTFNWPPNPSSNVGVELELDVSLGDSDGLKEPGSKKRGRSDSCAGSSSKACREKLRRDRLNDKFVELGSILEPERPPKTDKSAILIDAVRMVTQLRGEAQKLKDSNTSLQEKIKELKAEKNELRDEKQSLKAEKEKLEQRVKSMNPQPGFMHHPPPGIPAAFTPQGQAPSNKLVPFMGYPGVAMWQFLPPAAVDTSQDHVLRPPVA* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0656 229 MobiDBLite consensus disorder prediction 46 61 - -
Lan3g0656 229 SMART finulus 73 124 IPR011598 GO:0046983
Lan3g0656 229 CDD bHLH_AtILR3_like 72 147 - -
Lan3g0656 229 Gene3D - 58 116 IPR036638 GO:0046983
Lan3g0656 229 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 1 229 - -
Lan3g0656 229 Pfam Helix-loop-helix DNA-binding domain 71 118 IPR011598 GO:0046983
Lan3g0656 229 MobiDBLite consensus disorder prediction 46 73 - -
Lan3g0656 229 Coils Coil 115 170 - -
Lan3g0656 229 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 118 IPR011598 GO:0046983
Lan3g0656 229 PANTHER BHLH TRANSCRIPTION FACTOR 1 229 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Lan3g0656 229 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 142 IPR036638 GO:0046983
Lan3g0656 229 Gene3D arf6 gtpase in complex with a specific effector, jip4 117 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0656 Lan-Chr3 10224300 10227121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0656 1 229 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 67.220 3.77e-105 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan3g0656 HLH 9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0656 - - ccaj:109815088 370.548