Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0645 ATGTATCATCATACTAGATTCAACACAAAACCATTACATGTGGCTGACCCAGATGAGTCCGAGCCCGGGCCAACCTTAGAAGTTGGGCCTGCTTCACCTTCGTCGGGTGATGATACAAAAACTGAAGCACCATCACCCAAGAAAAGGAGGGAGATGAAGAAAAGGGTGGTAACAATACCGATCGGTGATATTGAAGGATCTAAGAGCAAAGGAGAGAATTATCCACCGTTTGATTCATGGGCATGGAGAAAATATGGCCAAAAACCCATTAAGGGTTCCCCTTATCCAAGGGGATACTACCGATGCAGCAGTTCAAAGGGGTGCCCAGCAAGGAAGCAAGTTGAGAGAAGCCGTGTGGACCCCACAAACCTCGTTGTCACTTACGCTTACGAACACAACCACTCCCTTCCACTCACAAAATCCAATTCCTCCGCCGTTGCCGCTGCCACCGTAACCGATGCTGTCACCGACTCACCAACTGACTCCGCTGCCAAACCACAGCCGGAGGAGCTGACGGTTTTCGCTAGCCATCCGGATCACGAATTCGCCGTCGACTCGGCAGTCCTACTCAGTCACCACCACCACGGCTCTGAGTTCGAGTGGTTCGACGACGTGGTCTCCGCCGGCGTTTTTGAAAGCCCGATCGGTGGAGTGTTGGAGGACGTGGCGCTGACTATGAGGGAAGAGGACGAGGAGGAGTCGCTTTTCGCCGATCTTGGTGAGTTGCCGGAATGTTCAGTGGTTTTCCGGCGGAGGAATATTCTTAGCGCGAAAGTAGTTCAGTGCGGTGGTGTCCCAAGATAA 804 0.5236 MYHHTRFNTKPLHVADPDESEPGPTLEVGPASPSSGDDTKTEAPSPKKRREMKKRVVTIPIGDIEGSKSKGENYPPFDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTNLVVTYAYEHNHSLPLTKSNSSAVAAATVTDAVTDSPTDSAAKPQPEELTVFASHPDHEFAVDSAVLLSHHHHGSEFEWFDDVVSAGVFESPIGGVLEDVALTMREEDEEESLFADLGELPECSVVFRRRNILSAKVVQCGGVPR* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0645 267 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 29 254 IPR044810 GO:0003700
Lan3g0645 267 Gene3D WRKY domain 64 138 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan3g0645 267 MobiDBLite consensus disorder prediction 1 73 - -
Lan3g0645 267 PANTHER OS01G0750100 PROTEIN 29 254 - -
Lan3g0645 267 ProSiteProfiles WRKY domain profile. 78 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan3g0645 267 Pfam WRKY DNA -binding domain 78 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan3g0645 267 SUPERFAMILY WRKY DNA-binding domain 73 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan3g0645 267 SMART WRKY_cls 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0645 Lan-Chr3 9976925 9981496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0645 14 254 WRKY Transcription Factor Family AT3G58710 49.412 7.82e-69 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan3g0645 WRKY 2.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0645 - - gmx:100127424 387.497