Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0638 ATGGCTCAGAAAACAGAAAAAGAAGAAACCGATAACATGTGCCAAAACTGCTTCCCCGCCATAACAACAACCACCTCTTCCACCGCAATATCACCTCCTTCTACATTACACACCGGAAACATCACCTCCTCTCGTTCCCTGAAGAGATCTTACACGGAGGCCACGCAGCAAGTGGGTCCTCCTAGTCCCGATGAAACGATGTCGTTTGAGGCGAAGCGTATCGTGAACCGGTGTTCCGGTTGTCGGAGGAGGGTTGGGCTTATCGGATTCCGATGTCGGTGCGGCGACCTTTTCTGCTCCGAGCATCGGTACTCTGATCGCCATGAATGTAGCTATGATTACAAAGCTGCTGGTAAAGAAGCTATTGCTAGGGAGAATCCTTTGATCAGAGCTGCTAAGATCGTTAAGGTTTGA 414 0.4976 MAQKTEKEETDNMCQNCFPAITTTTSSTAISPPSTLHTGNITSSRSLKRSYTEATQQVGPPSPDETMSFEAKRIVNRCSGCRRRVGLIGFRCRCGDLFCSEHRYSDRHECSYDYKAAGKEAIARENPLIRAAKIVKV* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0638 137 MobiDBLite consensus disorder prediction 26 63 - -
Lan3g0638 137 ProSiteProfiles Zinc finger AN1-type profile. 72 118 IPR000058 GO:0008270
Lan3g0638 137 SUPERFAMILY AN1-like Zinc finger 66 131 IPR035896 -
Lan3g0638 137 Pfam AN1-like Zinc finger 78 115 IPR000058 GO:0008270
Lan3g0638 137 MobiDBLite consensus disorder prediction 26 66 - -
Lan3g0638 137 PANTHER AN1-LIKE ZINC FINGER PROTEIN 1 137 - -
Lan3g0638 137 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 137 - -
Lan3g0638 137 Gene3D - 49 133 IPR035896 -
Lan3g0638 137 SMART AN1_Zf_4 78 115 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0638 Lan-Chr3 9104338 9105049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0638 76 137 C2H2 Transcription Factor Family AT3G52800 61.290 3.65e-26 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0638 - - gmx:100815476 174.096