Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0629 ATGAAAATCCCTTGTTGTTCGGTGTGCCAAACACGTTACAACGAGAATGAACAAGTTCCGCTTCTTCTTCAATGCGGTCACGGTTTCTGCAAAGATTGCCTTTCTAGAATGTTCTCCTCTTCACCAGACTCAACTCTCACTTGCCCCCGGTGCCGCCACGTGTCCACCGTCGGAAACTCCGTTCAGGCTTTGCGCAAGAACTTCGCGGTTCTGGCACTCGTCCACTCCGCCGCAAACGCGGCGAGTTTGGACTGTGACTACACTGACGATGAGGAGGAAGCTGGCGGGGATGAGGATGAGGAGAGGCGGCGGTTGCGCGGCTCGCAGACATCGAGTTCGGGAGGGTGCGAGGTGGTGATCGAGGTCGGTGCGAACCAGGAGCTGAAATTGGTGAAGCGGATTGGGGAAGGGAGGAGGGCGGGAATGGAGATGTGGACGGCGGTGATTGGCAGCGGCGTTGGGCGGTCCGGGCACGAAGTGGCGGTGAAGAAGGTGGCTGTAGTGGAAGGGATGGATTTGGAATGGGTGCAGGGGAAGCTGGAGAGTTTGCGTAGGGCTTCGATGTGGTGTAGGAATGTGTGCACTTTTCATGGAGCAATGAAAGTGGAAGAAAGTTTGTGCCTTGTGATGGATAGGTGCTATGGATCAGTTCAGTCTGAGATGCAGCGCAATGAAGGGAGACTCACTCTGGAGCAAGTCCTAAGATATGGGGCAGACATAGCACGTGGTGTTGTTGAGCTTCATGCTGCAGGCGTTGTTTGCATGAATTTAAAACCTTCCAATCTTCTTCTCAATGCAAACGGTCATGCAGTGGTTTCTGATTATGGACTTGCAACTATTTTGAAGAAGCCTTCCTGTTGGAAGGCTCGACCGGAGTGTGACTCCTCAAAGATCCATTCCTGTATGGAATGTATTATGCTTAGTCCACATTATACAGCACCTGAGGCTTGGGAGCCTGTGAAGAAGTCTTTAAATTTGTTCTGGGATGATGCAATAGGTATATCTTTGGAGTCGGATGCCTGGAGTTTTGGTTGTACATTGGTGGAGATGTGCACGGGTTCTATTCCTTGGGCTGGTTTAAGTGCAGAAGAAATTTATCGAGCAGTTGTTAAGGCAAAGAAATTGCCTCCACAGTATGCTAGTGTGGTAGGTGGTGGAATTCCTAGGGAATTGTGGAAGATGATCGGAGAGTGCTTGCAATTCAAGCCATCTAAAAGGCCTACTTTTAATGCAATGCTAGCAATATTTCTCCACCATTTGCAGGAAATACCACACAGTCCTCCTGCAAGCCCTGATAATGACTCTGTTAAAGGCTCCGTGTCAAATGTGATGGAACCTTCCCAAGTACCTGAATTAGAAGTTCCTCAGGAAAATCCAAACCATCTTCTTCATCGACTTGTGTCTGAAGGGGATGCCACTGGTGTTAGAGATCTTCTTGCAAATGTGGCATCAGAAAATGGCAACAACTACATATCTTCTCTACTGGAAGCCCAAAATGCTGATGGGCAAACAGCTCTCCACTTAGCTTGTAGGCGTGGTAGTGCAGAACTTGTTGAGGCAATTTTGGAGTATGAAGAGGCAAATGTTGATGTCTTGGACAAAGATGGAGACCCCCCTCTTGTTTTTGCACTGGCAGCTGGGTCCCCAGAATGTGTTCGTAGCCTCATCACAAGAAATGCTAATGTGAGGTCACGATTGAGAGATGGCTTGGGCCCATCTGTGGCTCATGTTTGTGCCTATCATGGCCAACCAGATTGTATGCGAGAATTACTATTAGCTGGAGCTGATCCTAATGCAGTGGATGACGAAGGTGAATCTGTACTGCATAGGGCAATTGCCAAGAAGTACACAGACTGTGCTCTCATGATATTGGAGAATGGGGGCTGTAGATCAATGTCCATCTTGAATTCAAAGAATCTGACACCACTGCACTTGTGTGTGGCAACATGGAATGTCGCTGTTGTGAAGAGATGGGTGGAAGTTGCAACTTCTGATGAGATTGCCAAAGCAATTGACGTACCTAGCTCCATTGGCACTGCCTTGTGCATGGCAGCTGCTTCTAAGAAAGATCATGAAAGTGAGGGTAGAGAACTGGTGCGGACATTGCTTGCAGCAGGAGCAGATCCTTCTGCTCAAGATTCACAGAATGGGAGGACAGTTTTGCATACAGCTGCTATGACTAATGATGTAGAGTTGGTTAAGGTTATTCTTGCTGCTTGTGTTGATGTGAATATTTGCAATGTGCACAACAGTATACCTCTTCACTTAGCCTTAGCTAGGGGCGCGAAGGAATGTGTTGGACTGCTTTTAGCTGCAGGGGCAGATTGTAATTTGCAGGATGATGATGGTGACAATGCTTTCCATATAGCAGCACAGACAGCAAAAATGATACGTGAAAATCTTGATTGGCTTATTGTGATGCTAAGGAATCCCAATGCTGATATTGAAGTCAGAAACCACAGTGGCAAGACGCTACGTGACATCTTGGAGGCCCTTCCCCGAGAATGGATATCTGAAGATCTGATGGAGGCACTCATGAATAGAGGAGTTTGTTTGTCTCCTACGATATTTGAAGTGGGAGATTGGGTGAAGTTTAGAAGAACTGTCATAACTCCAACACATGGGTGGCAAGGTGCTAGGAAGAAGAGTGTTGGCTTTGTGCAAAGTTTTCTGGACAGAGATAATCTCGTTGTTTCATTTTGTTCTGGAGAGGTTCATGTTCTGGCAAATGAAGTTGTAAAAGTCATTCCATTGGACAGGGGACAACATGTACAACTAAAAAAAGATGTAAAAGAGCCCAGGTTTGGTTGGCGTGACCAATCACGTGACAGCATTGGGACAGTATTATGTGTTGACGATGATGGTATCCTCCGTGTTGGGTTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCAGCTGAGATGGAACGGGTTGAGGAATTCAATGTTGGAGACTGGGTTCGTATCCGTCCTACTCTAACATCTGCGAAGCATGGTTTAGGTTCTGTGACACCAGGAAGCATTGGAATTGTATATTGTATCAGACCAGACAGTAGTCTATTAATAGAACTGAGCTATCTTCCAAACCCATGGCATTGTGAACCAGAGGAGGTTGAGCATGTTGCTCCTTTTAGGATTGGGGATCGGGTATGTGTGAAGCGGTCTGTTGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCACAGTGTTGGAAGAATAAGTGAGATTGAGAATGATGGTCTTTTAATAATAGATATACCAAACCGACCCATTCCATGGCAGGCTGATCCATCTGATATGGAGAAGGTGGAGGATTTTAAGGTTGGTGATTGGGTCAGAGTGAAAGCTTCAGTGTCGTCTCCAAAATATGGATGGGAGGATATTACAAGGAACAGTATTGGGATAATTCATAGTTTGGAGGAGGATGGTGATGTCGGTGTTGCCTTTTGCTTCAGAAGTAAGCCTTTTTCTTGCTCAGTAACTGATGTGGAGAAAGCTCCTCCTTTTGAGCTGGGACAAGAAATTCATGTAATGGCATCTGTTACTCAGCCACGACTTGGATGGTCAAATGAATCACCAGCTACTGTTGGAAAAATAGTGAGAATCGACATGGATGGTGCTCTCAATGTGAGGGTCACTGGTAGGCACAGCTTGTGGAAAGTTTCTCCTGGTGATGCAGAACGACTTCCAGGATTTGAAGTTGGTGATTGGGTTCTCTCAAAATCAAGCCTGGGAACCAGACCAAGTTATGACTGGAGTGGTGGTGTTGGGAGAGAAAGTTTAGCCGTTGTGCATAGTGTACAGGATTCTGGATACCTGGAGTTAGCTTCCTGTTTCCGTAAAGTGAAGTGGATCACTCACTACACTGATGTTGAAAAGGTTCCTAGCTTTAAAGTCGGGCAGTATGTTAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGTTGGAGAGGAGCTAAGCCTGAATCGCAAGGGGTTATAACCAGCATTCATGCTGATGGAGAAGTCAGGGTCGCATTCTTTGGTTTACCAGGATTGTGGAGAGGAGATCCTTCAGACCTGCAGATTGAACAAATGTTTGAAGTTGGAGAGTGGGTAAGGTTGAAAGATAATGCAAATAATTGGAAATCGATTGGGCCAGGTAGTGTTGGTGTAGTACAAGGAATCGGGTATGAAGGAGATGAATCAGACAGAAGCACTTACGTTGATTTCTGTGGGGAGCAAGAAAAGTGGGTAGGACCAAGTTCCCATCTTGAAAGAGTTGACAAGCTTTTTGTTGGACAGAAGGTTAGAGTTAAAGAATATGTAAAGCAACCAAGATTTGGGTGGTCAGGGCAGACCCATGCAAGTATCGGAACTATACAAGCAATTGATGCTGATGGAAAGCTTCGAATATATACACCAGCAGGATCGAAAGCATGGACGTTGGACCCATCAGAAGTGGAGATAGTAGAAGAGAAGGAGCTTTGCATTGGCGACTGGGTAAGGGTTAGAGCATCGGTTTCAACCCCAACCCATCAGTGGGGGGAAGTTAGCTATTCAAGCATTGGGGTGGTGCATCAGATGGAACATGAGGATCTGCGGGTGGCATTCTGTTTCATGGAGAAACTATGGTTATGTAAGGCATGGGAAATGGAGCGTGTTAGGCCATTTAAAGTGGGGGATAAGGTAAAGATCAGAGATGGACTGGTGACCCCACGGTGGGGATGGGGAATGGAGACACATGCCAGCAAGGGACAAGTAGTAGGCGTCGATGCAAATGGCAAACTAAGAATAAAGTTTCGGTGGAGGGAAGGGAGGCCCTGGATAGGAGACCCTGCTGATATTGCCCTTGATGAGAACTGA 4848 0.4672 MKIPCCSVCQTRYNENEQVPLLLQCGHGFCKDCLSRMFSSSPDSTLTCPRCRHVSTVGNSVQALRKNFAVLALVHSAANAASLDCDYTDDEEEAGGDEDEERRRLRGSQTSSSGGCEVVIEVGANQELKLVKRIGEGRRAGMEMWTAVIGSGVGRSGHEVAVKKVAVVEGMDLEWVQGKLESLRRASMWCRNVCTFHGAMKVEESLCLVMDRCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGVVCMNLKPSNLLLNANGHAVVSDYGLATILKKPSCWKARPECDSSKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDAIGISLESDAWSFGCTLVEMCTGSIPWAGLSAEEIYRAVVKAKKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFNAMLAIFLHHLQEIPHSPPASPDNDSVKGSVSNVMEPSQVPELEVPQENPNHLLHRLVSEGDATGVRDLLANVASENGNNYISSLLEAQNADGQTALHLACRRGSAELVEAILEYEEANVDVLDKDGDPPLVFALAAGSPECVRSLITRNANVRSRLRDGLGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAIAKKYTDCALMILENGGCRSMSILNSKNLTPLHLCVATWNVAVVKRWVEVATSDEIAKAIDVPSSIGTALCMAAASKKDHESEGRELVRTLLAAGADPSAQDSQNGRTVLHTAAMTNDVELVKVILAACVDVNICNVHNSIPLHLALARGAKECVGLLLAAGADCNLQDDDGDNAFHIAAQTAKMIRENLDWLIVMLRNPNADIEVRNHSGKTLRDILEALPREWISEDLMEALMNRGVCLSPTIFEVGDWVKFRRTVITPTHGWQGARKKSVGFVQSFLDRDNLVVSFCSGEVHVLANEVVKVIPLDRGQHVQLKKDVKEPRFGWRDQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFNVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGIIHSLEEDGDVGVAFCFRSKPFSCSVTDVEKAPPFELGQEIHVMASVTQPRLGWSNESPATVGKIVRIDMDGALNVRVTGRHSLWKVSPGDAERLPGFEVGDWVLSKSSLGTRPSYDWSGGVGRESLAVVHSVQDSGYLELASCFRKVKWITHYTDVEKVPSFKVGQYVRFRTGLVEPRWGWRGAKPESQGVITSIHADGEVRVAFFGLPGLWRGDPSDLQIEQMFEVGEWVRLKDNANNWKSIGPGSVGVVQGIGYEGDESDRSTYVDFCGEQEKWVGPSSHLERVDKLFVGQKVRVKEYVKQPRFGWSGQTHASIGTIQAIDADGKLRIYTPAGSKAWTLDPSEVEIVEEKELCIGDWVRVRASVSTPTHQWGEVSYSSIGVVHQMEHEDLRVAFCFMEKLWLCKAWEMERVRPFKVGDKVKIRDGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFRWREGRPWIGDPADIALDEN* 1616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0629 1615 CDD RING-HC_ScPSH1_like 5 52 - -
Lan3g0629 1615 ProSiteProfiles Ankyrin repeat region circular profile. 716 745 - -
Lan3g0629 1615 ProSiteProfiles Ankyrin repeat profile. 749 781 IPR002110 GO:0005515
Lan3g0629 1615 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Lan3g0629 1615 Gene3D Transferase(Phosphotransferase) domain 1 124 439 - -
Lan3g0629 1615 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Lan3g0629 1615 ProSiteProfiles Ankyrin repeat profile. 716 748 IPR002110 GO:0005515
Lan3g0629 1615 SMART ANK_2a 570 599 IPR002110 GO:0005515
Lan3g0629 1615 SMART ANK_2a 716 745 IPR002110 GO:0005515
Lan3g0629 1615 SMART ANK_2a 676 711 IPR002110 GO:0005515
Lan3g0629 1615 SMART ANK_2a 603 634 IPR002110 GO:0005515
Lan3g0629 1615 SMART ANK_2a 501 531 IPR002110 GO:0005515
Lan3g0629 1615 SMART ANK_2a 749 778 IPR002110 GO:0005515
Lan3g0629 1615 SMART ANK_2a 782 817 IPR002110 GO:0005515
Lan3g0629 1615 SMART ANK_2a 638 669 IPR002110 GO:0005515
Lan3g0629 1615 SMART ANK_2a 535 564 IPR002110 GO:0005515
Lan3g0629 1615 SUPERFAMILY Protein kinase-like (PK-like) 129 449 IPR011009 -
Lan3g0629 1615 Pfam Mind bomb SH3 repeat domain 1361 1482 IPR040847 -
Lan3g0629 1615 Pfam Mind bomb SH3 repeat domain 857 975 IPR040847 -
Lan3g0629 1615 Pfam Mind bomb SH3 repeat domain 1107 1225 IPR040847 -
Lan3g0629 1615 Pfam Mind bomb SH3 repeat domain 1491 1609 IPR040847 -
Lan3g0629 1615 Pfam Mind bomb SH3 repeat domain 1233 1355 IPR040847 -
Lan3g0629 1615 Pfam Mind bomb SH3 repeat domain 1037 1101 IPR040847 -
Lan3g0629 1615 Pfam Protein kinase domain 155 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0629 1615 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 2 1614 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Lan3g0629 1615 PRINTS Ankyrin repeat signature 502 517 IPR002110 GO:0005515
Lan3g0629 1615 PRINTS Ankyrin repeat signature 698 712 IPR002110 GO:0005515
Lan3g0629 1615 SUPERFAMILY RING/U-box 5 57 - -
Lan3g0629 1615 ProSiteProfiles Ankyrin repeat profile. 535 567 IPR002110 GO:0005515
Lan3g0629 1615 Pfam RING-type zinc-finger 6 49 IPR027370 -
Lan3g0629 1615 ProSiteProfiles Ankyrin repeat profile. 570 602 IPR002110 GO:0005515
Lan3g0629 1615 ProSiteProfiles Ankyrin repeat region circular profile. 501 523 - -
Lan3g0629 1615 Pfam Ankyrin repeats (3 copies) 483 563 IPR002110 GO:0005515
Lan3g0629 1615 Pfam Ankyrin repeats (3 copies) 695 780 IPR002110 GO:0005515
Lan3g0629 1615 ProSiteProfiles Protein kinase domain profile. 128 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0629 1615 Gene3D - 569 713 IPR036770 -
Lan3g0629 1615 Pfam Ankyrin repeats (many copies) 573 622 IPR002110 GO:0005515
Lan3g0629 1615 Gene3D - 456 568 IPR036770 -
Lan3g0629 1615 ProSiteProfiles Ankyrin repeat profile. 501 534 IPR002110 GO:0005515
Lan3g0629 1615 SUPERFAMILY Ankyrin repeat 486 824 IPR036770 -
Lan3g0629 1615 Gene3D - 714 847 IPR036770 -
Lan3g0629 1615 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 2 1614 - -
Lan3g0629 1615 ProSiteProfiles Ankyrin repeat region circular profile. 749 781 - -
Lan3g0629 1615 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 84 IPR013083 -
Lan3g0629 1615 SMART ring_2 6 51 IPR001841 -
Lan3g0629 1615 MobiDBLite consensus disorder prediction 88 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0629 Lan-Chr3 8660618 8677809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0629 192 418 MAP Kinase Kinase Kinase AT2G31800 29.787 1.43e-16 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lan3g0629 Pkinase 4.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0629 K16279 - gmx:100777576 2956.39