Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0624 ATGAACTCACTAAGCCGAATGATTAAGAACATATTCTCAGACAACAGCAACATCATGCTTGCAGCTATCATTTCTTTGCTCCTAGTCATACTCTTTGTGCTTCTCCTCCATCTCTATGCCAAGTGGTTCTTGTTTCAGGCTCAAGCACGTGCCCGCCGTCGTCGCCGCCGTCACCGGATAACCACTGTGACTGTCTCCGACGTCTTTGGCCCTGCAAGGTTCCACCACTTCCACAGCTTCAACATACAAGACTCACCCCTCTCAAGTTCCTATACAAAAGGCCTTGATTCTTCTATCATTGCTGCTATTCCAATGTTTATGTACAAAGCTGAACAAGCACAAGAACAAAGTCATGATGGTTATGATGATAAGAAGATTGAACGAGAGCTTGAATGTGTTATTTGTTTGAGTCGTTTTGAAGATGGTGAGATGGGTAAGTGTTTGCCAAAGTGTGGACATGGTTTTCATGTTGAGTGCATTGACATGTGGTTGAGTTCACATTCCAATTGTCCAATTTGTAGAGCTCCTATTGTGGCTTTGGTTGGTGAAGGTGATGATTCTTCTGCTTTGGTTGAGATTGTGGTTGATGATGCTATTGCTGCTACAAGTTCTGATGAGATTAGAGAGAATGAGAATGGAAATGATGATGCAGGGGAAAGGAATGGGGGTGGTGTTATTATGGTCAAGGACAGTCAGTCTTCCATTATTTGTGGTCAATGGTTTTAA 726 0.4298 MNSLSRMIKNIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLFQAQARARRRRRRHRITTVTVSDVFGPARFHHFHSFNIQDSPLSSSYTKGLDSSIIAAIPMFMYKAEQAQEQSHDGYDDKKIERELECVICLSRFEDGEMGKCLPKCGHGFHVECIDMWLSSHSNCPICRAPIVALVGEGDDSSALVEIVVDDAIAATSSDEIRENENGNDDAGERNGGGVIMVKDSQSSIICGQWF* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0624 241 Pfam Ring finger domain 131 174 IPR001841 -
Lan3g0624 241 CDD RING-H2_EL5_like 131 174 - -
Lan3g0624 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 179 IPR013083 -
Lan3g0624 241 PANTHER RING FINGER DOMAIN-CONTAINING 2 221 - -
Lan3g0624 241 SMART ring_2 132 173 IPR001841 -
Lan3g0624 241 ProSiteProfiles Zinc finger RING-type profile. 132 174 IPR001841 -
Lan3g0624 241 SUPERFAMILY RING/U-box 121 181 - -
Lan3g0624 241 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 2 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0624 Lan-Chr3 7903946 7914842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0624 10 231 Rapid Response to Elicitors AT3G16720 31.718 6.59e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0624 - - lang:109329145 295.434