Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0614 ATGACCATGAAGTCTTTGTCACTGGATCACTGGAGGAGTTACTTCCGTTCCGCGAATTCGGATATATTTGAGATAATTCACCATGCTATCATGGTGGCTGCTTCTGATTGTCCTAAAGAGTTCAGGTTGAGAAGGGATAAGATTGCAGAGACTTTGTTCTCTTGCAAGTTGAGTCGTTGTGTTGGGTGTGATAGGGTGGAATTGGTTGTGTCTGCTGGTGATAAAGAACATAATAATGTTGACAATGATGATGATGACGATGATGATGTTGAGTTTGAGGCCGGTGCAAGCAAAGAGAGCAAGGTCAATAGTGGTGGTATCAGAGAGGACCATAGTGATATGAATGTGAACCATGTTAGCAATTTTAGCTTTGGAGATGCTGAGGCATTGACTGATGAGATTGAAGAAGAGTCTCAGTATATTGGGGAGGTCTTGAGGATCAAAGACATTCTCCTTAACCATGAAGAAGAGTCTGACTCTGTCTTATTCGAGTCATTAAGGAGGCTACAGCTGATGGAATTAACTGTGGATCGTCTAAAGGCTACTGAGATTGGAAAGGCTGTTAATCCCCTACGAAAGCATGGATTAAATGAAATTCGTCAACTCGCACGAACTCTTATCGGTGAATGGAAAGAAATGGTTGACGAGTGGGTCAAGGCTACCAGTTCTGCTGCTCTTGCAGCTTCCGAAGGCACTCCAGATTCGGTAAATCCATCCGTTGTTGATGACGACGAAGAAGGACTTCCATCACCTCCTATGGATGAAGGGGCTTTCTTTGTTACACAAGCCGGTTCAATAGAACTTTCACAGTTCTTCGATGGCATAGATGATTATGGAAATCCTCGACAAAGTGGACAGTTCAACAGGAACCGTGAAAATGGCAGAAAACCTTCTATGGACAGTCACACTATAGAAAAGGGGATAATGCAAGCTTCTAATGCAACAAGCATCACTAGAAAGGACAGTAAGAGTCAGCAAGCAAAGAAAAACGAGGTTGCTGTGAGGTTGAATAAGCCTTTAACTGCTGATTCTGGCCTCGGCAGACCACCAAAATCGAGTATGCAACGAAAAAGCAATGCTGAGCCGAAGATGCAACAAAAAGTAGATAGCAATACTTTCACAAAGAGGCCTCCAATCGGTCAGCAAGATAAATTGAAGTATTCGGATGATGCTGCTGTCCAAGTGAAGCTAGAAGCCACCAAGAGGAAACTTCAGGAGCGTTATCAACAAGCTGAAAATGCAAAGAGACAGCGTACAATTCAAGTTATGGAATTGAACGATCTCCCCAAACAAGCAGTTGTCCACCGAAACCCACATTTCAAACCTGGAAATCATAATAGGCACTGGGGGGCTCAAGCACGACGATAG 1368 0.4357 MTMKSLSLDHWRSYFRSANSDIFEIIHHAIMVAASDCPKEFRLRRDKIAETLFSCKLSRCVGCDRVELVVSAGDKEHNNVDNDDDDDDDVEFEAGASKESKVNSGGIREDHSDMNVNHVSNFSFGDAEALTDEIEEESQYIGEVLRIKDILLNHEEESDSVLFESLRRLQLMELTVDRLKATEIGKAVNPLRKHGLNEIRQLARTLIGEWKEMVDEWVKATSSAALAASEGTPDSVNPSVVDDDEEGLPSPPMDEGAFFVTQAGSIELSQFFDGIDDYGNPRQSGQFNRNRENGRKPSMDSHTIEKGIMQASNATSITRKDSKSQQAKKNEVAVRLNKPLTADSGLGRPPKSSMQRKSNAEPKMQQKVDSNTFTKRPPIGQQDKLKYSDDAAVQVKLEATKRKLQERYQQAENAKRQRTIQVMELNDLPKQAVVHRNPHFKPGNHNRHWGAQARR* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0614 455 MobiDBLite consensus disorder prediction 225 251 - -
Lan3g0614 455 MobiDBLite consensus disorder prediction 434 455 - -
Lan3g0614 455 MobiDBLite consensus disorder prediction 440 455 - -
Lan3g0614 455 MobiDBLite consensus disorder prediction 351 378 - -
Lan3g0614 455 MobiDBLite consensus disorder prediction 272 386 - -
Lan3g0614 455 MobiDBLite consensus disorder prediction 305 321 - -
Lan3g0614 455 Coils Coil 394 421 - -
Lan3g0614 455 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 3 454 - -
Lan3g0614 455 SMART TFS2_5 141 216 IPR003617 GO:0005634
Lan3g0614 455 Pfam TFIIS helical bundle-like domain 166 214 IPR017923 -
Lan3g0614 455 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 133 228 IPR035441 -
Lan3g0614 455 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 3 454 IPR044805 -
Lan3g0614 455 CDD TFIIS_I 141 215 - -
Lan3g0614 455 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 140 223 IPR035441 -
Lan3g0614 455 ProSiteProfiles TFIIS N-terminal domain profile. 142 217 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0614 Lan-Chr3 7452029 7456357 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lan3g0614 Med26 1.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0614 - - gmx:100799367 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0840 10 12360422 12364683 Lan3g0614 3 7452029 7456357 LSH