Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0602 ATGGGACTGTGCCATGCAAAACCAATTGAAACTTCACAAACCCAAAGAGAAAACCAACCATTCCAAAATGACAATGAATTTTTACCACTGCCACCAAGGTCCTCATCAAAGTTTCCCTTTTATAGTCCAAGCCCTTTGCATAAATTCTTCAAAAACTCACCTTCAAACAGCACTCCCTCTAGTGTGAGCTCAACCCCTCTGCGCCTCTTCAGGAGGCCATTTCCTCCACCTTCCCCGGCCAAACACATAAAGGCGCTGCTCGCGAGACGCCACGGTTCAGTGAAGCCTAATGAGGCCACAATTCCTGAAGGGAGTGAGTGTGTGATTGGTTTGGATAAGAGTTTTGGGTTTTCTAAGCAGTTTGAGGTTCATTATGAACTTGGAGAAGAAGTTGGGCGTGGCCATTTTGGTTATACTTGCTCTGCCAAGGGAAAGAAGGGAAGCTTGAAGGGGCATGAAGTTGCTGTTAAAGTCATTCCAAAATCAAAGATGACAACAGCAATTTCTATAGAGGATGTGAGGAGAGAAGTAAAGATATTGCGAGCTCTAACCGGGCATAAAAATCTGGTGAAATTCTATGAAGCTTATGAGGATGACAACAATGTTTATATAGTAATGGAGTTATGCAAAGGAGGTGAACTTCTAGATAAGATCCTTTCCAGGGGTGGAAAGTACTCAGAAGAGGATGCCAAGGTTGTTATGGTTCAGATATTAAGTGTGGTAGCCTTCTGTCATCTACAGGGTGTTGTTCACCGTGATTTGAAGCCGGAGAATTTTCTTTTTACTTCTAAGGATGAAAATTCCACACTGAAGGCCATTGATTTTGGATTATCCGACTATGTAAAACCAGATGAAAGGTTGAATGATATTGTGGGAAGTGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCTTATGGAACAGAAGCAGATATGTGGAGCATTGGTATAATTGCTTATATTCTTTTATGTGGAAGCCGACCCTTCTGGGCCCGTACCGAGTCTGGCATATTTCGAGCTGTTTTGAAGGCAGATCCAAGTTTTGATGAAGGTCCTTGGCTTTCTTTATCAGCTGATGCAACTGATTTTGTGAAGAGACTATTGAACAAGGATTATCGTAAAAGACTAACTGCAGCTCAGGCTCTCAGTCATCCATGGCTGACAAATCACGGTGATGATATGAGGATACCTTTTGATATGATAATCCCAAAGCTTATTAATGCTTACATATGCTCATCTTCTCTGCGCAAAACGGCATTAAGGGCTCTTGCAAAGACATTAACATTAGTGCAACTAGCGTATCTCAAGGAACAATTTACTTTGTTAGGACCAAACAAAAGTGGCCTAATCTCTATGCAGAACTTCAAGACGGCTATTTTAAAGAGCGCCACCGATGCTTCGAAGGATTCACGAGTCTTGGATTATGTGAACATGGTTAGTTCAATCCAATATCGTAAACTCGATTTTGAGGAATTTTGTGCTGCTGCTATAAGTGTCCATCAACTAGAGGGAATGGAGAGCTGGGAGCAACATGCAAGGAGTGCCTATGAGCTGTTTGAAAAGGATGGAAATAGACCAATTATGGTTGAAGAGCTTGCCTCGGAACTTGGGCTTAGTCCATCAGTGCCAGTTCATGTGGTACTTCAAGATTGGATACGACACTCGGACGGGAAGCTTAGTTTCTTGGGGTTTGTCAGACTTCTGCATGGAGTTTCTTCGCGAACACTTCAGAAGGCTTGA 1740 0.4247 MGLCHAKPIETSQTQRENQPFQNDNEFLPLPPRSSSKFPFYSPSPLHKFFKNSPSNSTPSSVSSTPLRLFRRPFPPPSPAKHIKALLARRHGSVKPNEATIPEGSECVIGLDKSFGFSKQFEVHYELGEEVGRGHFGYTCSAKGKKGSLKGHEVAVKVIPKSKMTTAISIEDVRREVKILRALTGHKNLVKFYEAYEDDNNVYIVMELCKGGELLDKILSRGGKYSEEDAKVVMVQILSVVAFCHLQGVVHRDLKPENFLFTSKDENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGIIAYILLCGSRPFWARTESGIFRAVLKADPSFDEGPWLSLSADATDFVKRLLNKDYRKRLTAAQALSHPWLTNHGDDMRIPFDMIIPKLINAYICSSSLRKTALRALAKTLTLVQLAYLKEQFTLLGPNKSGLISMQNFKTAILKSATDASKDSRVLDYVNMVSSIQYRKLDFEEFCAAAISVHQLEGMESWEQHARSAYELFEKDGNRPIMVEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTLQKA* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0602 579 Pfam Protein kinase domain 125 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0602 579 SMART serkin_6 125 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0602 579 SUPERFAMILY EF-hand 416 570 IPR011992 -
Lan3g0602 579 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 574 - -
Lan3g0602 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Lan3g0602 579 ProSiteProfiles Protein kinase domain profile. 125 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0602 579 Gene3D Transferase(Phosphotransferase) domain 1 215 401 - -
Lan3g0602 579 Gene3D Phosphorylase Kinase; domain 1 118 214 - -
Lan3g0602 579 MobiDBLite consensus disorder prediction 1 36 - -
Lan3g0602 579 MobiDBLite consensus disorder prediction 8 30 - -
Lan3g0602 579 CDD STKc_CAMK 124 386 - -
Lan3g0602 579 SUPERFAMILY Protein kinase-like (PK-like) 124 416 IPR011009 -
Lan3g0602 579 ProSitePatterns Protein kinases ATP-binding region signature. 131 157 IPR017441 GO:0005524
Lan3g0602 579 Gene3D - 408 570 - -
Lan3g0602 579 PANTHER CDPK-RELATED KINASE 1 25 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0602 Lan-Chr3 7079212 7085740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0602 1 577 EF-hand Containing Proteins AT3G50530 66.244 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan3g0602 Pkinase 8.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0602 - - gmx:100783262 979.163