Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0578 ATGAAGAAGTGTGAGTTATGCAAAGTCACAGCTACAACTTTCTGTGAGTCCGACCAGGCTAGCTTATGCTGGGACTGCGATGCAAAAGTTCATGGTGCTAACTTCTTAGTGGCTAGACACACGAGGACTCTTCTCTGCCACACGTGCCACTCCCTTACGCCGTGGAAGGCCTCCGGCGCTTTTCTCGGGAACACTGTTTCGCTTTGTGAGGGTTGCGCCGGTGGAACTAGGGTTCACGCCGATGAAGTTGATGAGAGTGAAGGAGACAATGACGATGAGGTAGAAAGCTCCGATGATGAGGTGGAAGACGAAGACGGAGATAACCAGGTTGTTCCTTGGTCTTCAACGGCGACGACTCCACCGGCTTGTAGCTCCTCCTGTGTTGAAGGGTCGGTTACCAGGTTCAGCCATGGCTATGACTATGAGGATGTTTCTGAATCGGACACCACAGTCTCGGTGAAACGACGTCGTGAGGATAATGATTCTCAGGAGGGTTCGAAACGGAGGCACGTGCACAGTGGGGAGAGGAGGTTGATTTGTTAG 543 0.5212 MKKCELCKVTATTFCESDQASLCWDCDAKVHGANFLVARHTRTLLCHTCHSLTPWKASGAFLGNTVSLCEGCAGGTRVHADEVDESEGDNDDEVESSDDEVEDEDGDNQVVPWSSTATTPPACSSSCVEGSVTRFSHGYDYEDVSESDTTVSVKRRREDNDSQEGSKRRHVHSGERRLIC* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0578 180 MobiDBLite consensus disorder prediction 139 180 - -
Lan3g0578 180 MobiDBLite consensus disorder prediction 80 122 - -
Lan3g0578 180 MobiDBLite consensus disorder prediction 138 180 - -
Lan3g0578 180 PANTHER - 1 177 - -
Lan3g0578 180 SMART bboxneu5 1 45 IPR000315 GO:0008270
Lan3g0578 180 CDD Bbox1_BBX-like 3 45 - -
Lan3g0578 180 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 177 - -
Lan3g0578 180 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Lan3g0578 180 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Lan3g0578 180 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0578 Lan-Chr3 6358671 6360278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0578 2 121 C2C2-CO-like Transcription Factor Family AT4G27310 43.210 1.87e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan3g0578 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0578 - - lang:109338335 238.81